Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00889 ATGATGGAGCAAGCTCATCCTTGTGGAGGAGCAACACTTGTTACTCTTTCATTTGCACTACTTTTCTTCTCTACTTTCACGCATGCCTTCTCTTCTGCTGCGTACCCGGAATTGAATCATGTAAAACCTAGGCACTCACGTCTTCTCAGGAGTGCCGTGCAACGTGAAACTCCTACATCACAGCTTTCTGAAATATGGTCACCTCTGGAAAGCCAAGGATGGAAACCTTATGTTGAAAATAAGCCATCATTACCAGAGAAGTCCGAGGGATATATCCAGGTCTTTCTTGATGGTGGTTTGAACCAACAAAGAATGGGGATATGTGATGCAGTTGCTGTTGCAAAGATTCTGAATGCTACTTTGGTGATTCCATACCTTGAGCTAAATCCTGTATGGCGAGATTCAAGCTCCTTCCTGGATATATTTGATGTGGATCATTTCATTGATGTATTGAAGGATGATATTTCTATAGTTAAAGAGCTGCCTGAAGAATACTCCTGGAGCACAAGGGAGTACTATGCCATGGCTATCCGTGAAACCAGAATCAAGGCTGCACCTGTGCATGCATCAGCCCACTGGTATCTGGAGAATGTTTTGCCTGTCCTACAGAGTTATGGTATTGCTGCAATCTCTCCATTTTCTCACCGACTGAGTTTTGACAACTTGCCTATGGATATTCAACACCTACGCTGTAAAGTCAACTTCCAAGCTTTAACTTTTGTTCCTCATATCAGAACACTTGGGGATGCCCTTATCAGCCGCCTTCGCTATCCTCGAGGCTCAGCTAGAGAAATGGGCTCCAACTACCTTCAAGAGGTCACCAGTGCAGTTGATAGTAAAAATGCAGGGAAATTTGTTGTTCTACACCTCCGATTTGATAAGGATATGGCAGCCCATTCAGCCTGTGATTTTGGAGGTGGAAAAGCTGAAAAATGGGCCCTTGCAAAGTATAGGCAAGTAATTTGGCAGGGGAGGGTTCTTAATTCCCAATTCACTGATGAAGAGTTGAGGAGTCAAGGCCGATGCCCGATGACTCCCGAAGAGGTTGGATTGTTGCTAGCAGCTCTGGGATTTGACAATAGCACTCGTTTATATCTTGCCTCTCACAAGGTCTATGGTGGAGAAGCAAGGATTTCAACTTTGAGGGAATTATTTCCTCTGATGGAAGATAAAAAGAGCCTTGCTTCATCTGAAGAGCGTTCTCTGATAAAGGGAAAAGCTTCTCTACTAGCTGCACTTGATTACTATGTTGGCTTGCATAGTGACATCTTCATCTCTGCTTCCCCAGGAAACATGCACAATGCATTGGTTGGACACCGGACTTACTTGAACTTAAAGACTATAAGGCCAAATATGGCATTGATGGGTCAGCTATTCCTGAATAAAACCATTGAGTGGTCAGACTTTCAGGATGCAGTGGTTGAAGGTCACCAAAATAGACAAGGGCAACTAAGGCTGAGGAAGCCTAAACAATCCATATATACATATCCGGCTCCTGATTGCATGTGTCAAGCTTAG 1518 0.4394 MMEQAHPCGGATLVTLSFALLFFSTFTHAFSSAAYPELNHVKPRHSRLLRSAVQRETPTSQLSEIWSPLESQGWKPYVENKPSLPEKSEGYIQVFLDGGLNQQRMGICDAVAVAKILNATLVIPYLELNPVWRDSSSFLDIFDVDHFIDVLKDDISIVKELPEEYSWSTREYYAMAIRETRIKAAPVHASAHWYLENVLPVLQSYGIAAISPFSHRLSFDNLPMDIQHLRCKVNFQALTFVPHIRTLGDALISRLRYPRGSAREMGSNYLQEVTSAVDSKNAGKFVVLHLRFDKDMAAHSACDFGGGKAEKWALAKYRQVIWQGRVLNSQFTDEELRSQGRCPMTPEEVGLLLAALGFDNSTRLYLASHKVYGGEARISTLRELFPLMEDKKSLASSEERSLIKGKASLLAALDYYVGLHSDIFISASPGNMHNALVGHRTYLNLKTIRPNMALMGQLFLNKTIEWSDFQDAVVEGHQNRQGQLRLRKPKQSIYTYPAPDCMCQA 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00889 505 Pfam GDP-fucose protein O-fucosyltransferase 91 443 IPR019378 -
Cca06g00889 505 PANTHER O-FUCOSYLTRANSFERASE 39 13 504 - -
Cca06g00889 505 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 13 504 - -
Cca06g00889 505 PIRSF UCP009360 4 505 IPR024709 -
Cca06g00889 505 CDD O-FucT_plant 91 448 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00889 Cca-Chr6 22351772 22356147 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00889 62 504 Miscellaneous Gene Families AT1G22460 33.978 7.81e-87 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00889 - - gmx:100817796 924.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00889 06 22351772 22356147 Cca06g00889 06 22351772 22356147 ECH