Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00840 ATGGCGACGTTCGTTCcttcttcttcttcttcttcCACTTTCCGACCGACGTTGCTTCGCTGCTCCAACGAGCGCCGGGAGCTGTTTAGCCGCATTGCACCTGTCTATGATAACCTCAACGATTTGCTGAGCCTTGGACAACACCGTGTTTGGAAGCGAATGGCTGTTTCGTGGACTGGAGTGAAATTCGGAGACCGTGCGTTGGATGTGTGCTGTGGAAGTGGGGATTTATCCTTTCTCTTGTCTGACAAAGTTGGCTCTCATGGCAAGGTGATTGGTCTTGATTTTTCCAAGGACCAGCTATCAATTGCCTCATCTCGGCAGTGCTCGCTTTCAAAGAAGCGCTTCACGAATATTGAGTGGGTTGAAGGTGATGCTCTTGACTTACCATTTTCTGATGGTTGGTTTGATGCTATCACTATGGGCTATGGTCTTCGGAATGTGGTTGATAAGCGTAAAGCCATGCAGGAAATTTTACGTGTCCTAAAAGCTGGCGCTACAGTGTCTATCCTCGACTTTAATAAAAGCGACGACTCACTAGCTTCTTCAGTTACGGAATGGATGATTGACAATATTGTTGTCCCTGTTGCCTCTGTTTATGATCTTTCAGAGGAATACAGATATCTCAAGAGTTCAATAAGAGAATTTTTAACAGGGAAGGAATTGGAGAAACTTGCCTTAGAAGTTGGATTTTCTGCCGCCCAACATTATGAGATTGGTGGAGGCCTCATGGGGTGTTTAGTAGCTAAGCGTTAG 756 0.4484 MATFVPSSSSSSTFRPTLLRCSNERRELFSRIAPVYDNLNDLLSLGQHRVWKRMAVSWTGVKFGDRALDVCCGSGDLSFLLSDKVGSHGKVIGLDFSKDQLSIASSRQCSLSKKRFTNIEWVEGDALDLPFSDGWFDAITMGYGLRNVVDKRKAMQEILRVLKAGATVSILDFNKSDDSLASSVTEWMIDNIVVPVASVYDLSEEYRYLKSSIREFLTGKELEKLALEVGFSAAQHYEIGGGLMGCLVAKR 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00840 251 Hamap Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 251 IPR004033 GO:0008168
Cca06g00840 251 Hamap 2-phytyl-1,4-naphtoquinone methyltransferase [menG]. 24 251 IPR032904 GO:0042372|GO:0052624
Cca06g00840 251 PANTHER METHYLTRANSFERASE 9 251 - -
Cca06g00840 251 TIGRFAM MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 27 250 IPR004033 GO:0008168
Cca06g00840 251 ProSitePatterns ubiE/COQ5 methyltransferase family signature 1. 36 51 IPR023576 GO:0008168
Cca06g00840 251 Gene3D Vaccinia Virus protein VP39 31 251 IPR029063 -
Cca06g00840 251 ProSiteProfiles UbiE family SAM-binding methyltransferase profile. 19 251 IPR004033 GO:0008168
Cca06g00840 251 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 243 IPR029063 -
Cca06g00840 251 Pfam ubiE/COQ5 methyltransferase family 26 245 IPR004033 GO:0008168
Cca06g00840 251 PANTHER 2-PHYTYL-1,4-BETA-NAPHTHOQUINONE METHYLTRANSFERASE, CHLOROPLASTIC 9 251 - -
Cca06g00840 251 CDD AdoMet_MTases 66 166 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00840 56 188 Acyl Lipid Metabolism Gene Families AT3G18000 27.820 1.32e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00840 K23095 - gmx:100789470 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00840 06 21527395 21530677 Cca06g00840 06 21527395 21530677 ECH