Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00818 ATGGCAGATTCAAAACCAGGATTGAGGAAGCCAGTGTTCACCAAGGTTGATCAGCTTCGCCCGGGAACCAGTGGACACACTTTAACTGTGAAGGTGGTCAATGCTAAGATGGTGATGCAGAAGGGTCGTCCCGATGGTCCTCAATCTCGCCAAATGCGAATTGCTGAATGTTTGGTTGGTGATGAGACTGGAATGATCATATTCACTGCCAGAAATGATCAAGTGGATTTGATGAAAGAGGGTGCTACTGTGATCCTGCGTAATGCCAAAATTGACATGTTCAAAGGATCAATGAGGCTTGCTGTGGACAAGTGGGGCCGTGTGGAAGTGACAGAACCTGCTAGTTTCACTGTGAAGGAAGATAATAACTTGTCTCTCATCGAGTACGAACTCGTGAATGTTGTTGTGGAATGA 414 0.4614 MADSKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRPDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGSMRLAVDKWGRVEVTEPASFTVKEDNNLSLIEYELVNVVVE 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00818 137 PANTHER BNAA07G09820D PROTEIN 1 135 - -
Cca06g00818 137 Gene3D - 23 126 IPR012340 -
Cca06g00818 137 PANTHER OS05G0244600 PROTEIN 1 135 - -
Cca06g00818 137 CDD SoSSB_OBF 27 110 - -
Cca06g00818 137 SUPERFAMILY Nucleic acid-binding proteins 7 135 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00818 Cca-Chr6 21200496 21202755 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00818 - - gmx:100526985 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00818 06 21200496 21202755 Cca06g00818 06 21200496 21202755 ECH