Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00813 ATGGCAGCACTCGCTCCGGGAATCCTTATGAAGCTCCTCAACGCTCTCAACACCGGCGTCAAGCCCACCAGCGAGCACCGCAGCTCCCTCCTCCAGGTCACCGACATCGTCCCCGCCGACCTCGACGAGAAGAATTTGATCCCCAAGCAAGGCTTCTTCATCAAGGTCTCCGATTCCTCCCACTCCATCTACGCCTCTCTCCCCTCCGACCAAGACGACGTCGTTCTCAGCAACAAGATGCAGCTCGGCCAGTTCATCTACGTCGACCGCCTCGACCCCGGCTCTCCGCTCCCCGTCCTCCGCGGCGCCAAGCCCCTCCCCGGGAGGCACCCCCTCGTCGGCACGCCCGAGCCCTTAATGGGCCTCAGGCCCAATTCCGCTCCCCGCAGAGGCTCTTGGGGCACCAATGATGGCCTTTCGTCTCCCATGGTTTTCAAGCCGCTTAATTTGGACTTTGACCAGTGTACCCCTGTGAAAGCGAAGAACGGAGGGTTTCAATCGCCGTTGCTCCGAGGGAAGGTTGTTGGGACTCCGTTTTCTGGTGTCAGGTGTTCTGTTGGTGGTGCCAGAATGACTGATGCTAAAGGAGAGAGCCCTGCGTTGCTTCGGAAAAGCTGTGTGGTGACCAATAGTTCTAATGGCAAGTTTTCTCGGAGCAGGAGTGTTTCTGAACGGGAACATAGAGTCCCTTCTACTCCCTTCAAGTCAGCTGAAAAGAAGAATGTCACTCCACCACCGCGGTTGAGAAATGCAAGAGTGGTAGCCTCTTCTGGGGATGCAAATGGTCACAATCAAAACATGGACATGAATGCCACTTCTCAACCTCAATCTCAGTCTACTAATAATTCAGCTTTTGATAATTGCAACAATCTTAGCCTCCCCGTGAATTTACCAGGAAAGCTGAGCTCGCTGGGGAAGGAAGCCGTGCAGCAAAGAGAAGTGGCTCAGAAAATTGCCCTTCAAGCTTTAAGAGATGCTTCAGCTACTGAGACAGTCGTTCGGTCCCTCAAGATGTTCTCAAATTTATGCAAGTCAGCTCGACCTGATGCTCCTGCGACTTGTTTTGAACGGTTTTTGGAATTCCATAACGACATTGTGCAAGCAGTTAATGAAATGGTGTCCATTCAAGGTGCTACTTCAGCTTCAGAATTGGCTCAGAAATCAGATAAACAAGAACCACAGGTTTTGCATGAGGCTATGGACAATTGCATGGACCAATCTGGGAACACTGAATCAAACTTGTCCAAAAGAAGGGGTGCTTTATACAAGTCAATGGCTTCCATTCCTGAAAAGCATGAACACAAAGCAAACATGGGGAGGCTGCTAAGATCCAGTGCAAACCAAAAGGAGATTTTTGAGAAGAAAGGTTCTACCCCGCTTACAAAAATGCCTCTAGAACCTATTGTTGAAAATGATGAGAATAAGAAACCAGGAGGATCGTGCAGCTTAAGCAATACAATCAAACTGGGAAGGCAGGTTGAAACAGAAGCTGGGAATTGGTTTATGGAATTCATTGAGAAGGCCTTGGAAACTGGTTTGAAGAAAACAAAGGATGCATCAGATGGGGATGTGAGGAAAGTTCCTCAGTCTCTCTTACTGAAAGTTATGAATTGGGTGGAGGTAGAACAGTGCCGTAGTAACAAACGGCCTAGTCATCCTAAAGCAGCACAAATTGCTCGAAAGTTGAGAATAAAGGTGAAAAATCCTTGA 1710 0.4936 MAALAPGILMKLLNALNTGVKPTSEHRSSLLQVTDIVPADLDEKNLIPKQGFFIKVSDSSHSIYASLPSDQDDVVLSNKMQLGQFIYVDRLDPGSPLPVLRGAKPLPGRHPLVGTPEPLMGLRPNSAPRRGSWGTNDGLSSPMVFKPLNLDFDQCTPVKAKNGGFQSPLLRGKVVGTPFSGVRCSVGGARMTDAKGESPALLRKSCVVTNSSNGKFSRSRSVSEREHRVPSTPFKSAEKKNVTPPPRLRNARVVASSGDANGHNQNMDMNATSQPQSQSTNNSAFDNCNNLSLPVNLPGKLSSLGKEAVQQREVAQKIALQALRDASATETVVRSLKMFSNLCKSARPDAPATCFERFLEFHNDIVQAVNEMVSIQGATSASELAQKSDKQEPQVLHEAMDNCMDQSGNTESNLSKRRGALYKSMASIPEKHEHKANMGRLLRSSANQKEIFEKKGSTPLTKMPLEPIVENDENKKPGGSCSLSNTIKLGRQVETEAGNWFMEFIEKALETGLKKTKDASDGDVRKVPQSLLLKVMNWVEVEQCRSNKRPSHPKAAQIARKLRIKVKNP 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00813 569 MobiDBLite consensus disorder prediction 219 234 - -
Cca06g00813 569 MobiDBLite consensus disorder prediction 108 130 - -
Cca06g00813 569 PANTHER OS01G0108800 PROTEIN 1 569 - -
Cca06g00813 569 MobiDBLite consensus disorder prediction 211 287 - -
Cca06g00813 569 Pfam Plant protein of unknown function (DUF936) 217 540 IPR010341 -
Cca06g00813 569 Pfam Plant protein of unknown function (DUF936) 4 268 IPR010341 -
Cca06g00813 569 PANTHER EXPRESSED PROTEIN 1 569 IPR010341 -
Cca06g00813 569 MobiDBLite consensus disorder prediction 257 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00813 Cca-Chr6 21135530 21138085 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00813 - - gmx:100808883 923.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00813 06 21135530 21138085 Cca06g00813 06 21135530 21138085 ECH