Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00782 ATGGCAGGAGCTGCACCTCCACCCAAACCAGAAGAGCTTCAACCACACCCTGTGAAGGATCAGCTTCCACACGTTTCATACTGCATCACAAGTCCTCCTCCATGGCCGGAGGCAATACTTCTTGGTTTCCAACACTACCTGGTGATGCTTGGCACAACTGTTCTTATACCATCCACTCTTGTTACTCAGATGGGAGGAGGAAATGAAGAGAAAGCAAAAGTGATCCAGACTCTGCTGTTTGTGGCTGGCATAAACACATTTTTCCAAACACTATTTGGGACTCGTCTACCTGCAGTTATTGGAGGATCCTACACCTTTGTGCCAACTACTATTTCAATCATTTTGGCTGGTCGCTACAGTGACATTGTGAATCCTCAGGAGAGATTTGAGAGGATAATGCGTGGAACGCAGGGTGCACTTATTGTTGCTTCAACCCTTCaaattgttgttggattcagcggactttggcgcaatgtagtgaggttggttcctgttattctggcagatagagttTTTGGACTTTATGAGTTGGGCTTTCCAGTGCTTGCAAAATGTGTGGAGATTGGGCTGCCAGAAATTGTAATCTTACTAGTATTTTCACAGTACATTCCTCACGTGATGAAAGGAGAAAAGCCTATCGTTGATAGATTTGCGGTCTTATTCTCAGTGACAATTGTGTGGATTTATGCTCATCTTCTCACTGTGGGAGGAGCTTATAAAAATGTACCACAAACAACTCAGGATACTTGCAGAACTGATCGTGCTGGTATTATAAGTGGTGCACCTTGGATTAGAATCCCATATCCTTTCCAATGGGGAGCTCCCACATTTGATGCTGGGGAAGCTTTTGCTACGATGGCTGCTTCACTTGTTACATTAGTAGAGTCAACAGGTGCTTTTATTGCTGTTTCAAGGTATGCAAGTGCAACTCCATTGCCACCTTCAGTTCTGAGCCGTGGTGTCGGTTGGCAGGGGGTAGGAATTTTGTTATCTGGCATCTTTGGGACAGGGAATGGATCATCAGTTTCTGTAGAGAACGCAGGACTCTTAGCTTTGACAAGAGTTGGTAGCCGAAGGGTTGTTCAAATATCAGCAGGATTCATGATCTTTTTCTCCATACTTGGAAAATTTGGAGCTGTGTTTGCTTCAATCCCAGCACCAATAGTTGCAGCTTTATATTGCCTTTTCTTTGCCTATGTGGGTTCTGCAGGCCTCGGTTTCCTTCAGTTTTGCAATTTAAACAGCTTTAGAACCAAATTCATCTTGGGAGTCTCTATTTTCATGGGCTTCTCCATACCACAATACTTCAATGAGTACACAGCATTTAAGAACTATGGTCCAGTGCACACCCACGCTAGATGGTTCAACGACATGATCAATGTCGCATTCTCATCAAAAGCGTTTGTTGCTGGTTCGTTGGCTCTGTTCTTGGATACCACATTGTACAAGAAGGACAGCCAGACTCGTAAAGACACAGGCATGCATTGGTGGGATAGATTCAGTTCATTCAAGACAGATACAAGGAGTGAGGAGTTTTACTCTCTACCTTTCAATCTAAACAAGTTTTTCCCCTCTGTGTGA 1581 0.42 MAGAAPPPKPEELQPHPVKDQLPHVSYCITSPPPWPEAILLGFQHYLVMLGTTVLIPSTLVTQMGGGNEEKAKVIQTLLFVAGINTFFQTLFGTRLPAVIGGSYTFVPTTISIILAGRYSDIVNPQERFERIMRGTQGALIVASTLQIVVGFSGLWRNVVRLVPVILADRVFGLYELGFPVLAKCVEIGLPEIVILLVFSQYIPHVMKGEKPIVDRFAVLFSVTIVWIYAHLLTVGGAYKNVPQTTQDTCRTDRAGIISGAPWIRIPYPFQWGAPTFDAGEAFATMAASLVTLVESTGAFIAVSRYASATPLPPSVLSRGVGWQGVGILLSGIFGTGNGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPAPIVAALYCLFFAYVGSAGLGFLQFCNLNSFRTKFILGVSIFMGFSIPQYFNEYTAFKNYGPVHTHARWFNDMINVAFSSKAFVAGSLALFLDTTLYKKDSQTRKDTGMHWWDRFSSFKTDTRSEEFYSLPFNLNKFFPSV 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00782 526 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 2 526 - -
Cca06g00782 526 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 2 526 - -
Cca06g00782 526 Pfam Permease family 37 436 IPR006043 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00782 Cca-Chr6 20668870 20673177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00782 5 526 Organic Solute Cotransporters AT1G60030 79.356 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00782 - - gmx:100814601 990.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00782 06 20668870 20673177 Cca06g00782 06 20668870 20673177 ECH