Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00760 ATGGGTGAATTTCTTGTGGATGAAACAGTGCTTGAAGATAAGATGGGAGAGAGTGCTGCTTCCAATCCATCTTTGCAAGTGTCTGTTTCGTTTGGTAGATTTGAGAACGATTCCTTGTCATGGGAGAGATGGTCCTCTTTCTCTCCCAACAAGTACTTAGAAGAGGTTGAGAAGTGTGCCACTCCTGGATCAGTGGCCCAGAAGAAAGCTTACTTTGAAGCCCATTACAAGAAGGTTGCTGCTCGGAAAGCCGAATTGCTGGCACAAGAGAAGCAAAGGGAGAAAGATTCTTTCGGATCACAAGATCAAAGTGGAATAGATCTGAGTGGTAACACTGATGCAGAACTTGATGTATCCACCACTCAAGGTTCCAATGAAGGGGTTCAGCAAGAACAAAGTTCTGCTGAGATCCATAGGACCATTGTTAACGATTTTGCGGAGCAAGTTGCAGTTTCAAGTGATTACCAAAGTTCATCAGTTGAGGTTGAGAATAAAGAACCGGAAACTAGATCACATTCACATAGTTTCTTCCAGATATATGAACCTGAAGATGTATGCACGAAACAAGAAGAAAATCCTAACATTGAAGCTGAAGATGTGAAGGAAATTTCACATGTTGTGTACAAGGAGACAGGAAAGGCTTCAGAAATTGAAGCAAAAGATGTGAAATTGGATCATCCAAAGGAATCTAAGGTTAAATCTGTGAATAGGGTCAGCAATGCAGTCAAGACTAAGAAGAAGTCAGAGTTACCTACTGCTAAGGCACCCCAAATTTCCACACCAAGAAGTTCAAAGCCTGCACCAACTCCTACCAAAACAGTCACACCGACTTCTTCAACTAAGAAGGGAAATTCTCCATCTTTAACTAGGAGGCAAATTGCTTCCAGTGGGGAGAGCAGAAAAGTTGCTAACAAATCTTTGCACATGTCCATGAGCTTGGCTCCAAGTAATCCGGATCCAGCTCCTCACACTACCATGAGGAGATCTTTGATTATGGAGAAAATGGGGGATAAGGACATAGTCAAACGAGCATTTAAGACATTCCAGAATAGTTTCAACCAGCAAAAAAGTTCTGGTGAAGACAGATCTTTGATAAAGAAACAGGTTCCTTCAAGAGGGACCGTGTCAAAGGTTCCAACATCTACAGCTTTGAGGAAAGAAAATGGACGGCCAACTAAGGTTGAGAGTCTGGATAAAAGTGGAAATGTCGTACGAAATACTTTGGGCCCAAAAAGTAACATTAGAGCAGAGAAAGGGAAAGAGTCTTCAAGAAAAATAGAGGAAAAATCTAACACAAAAGGGGTGGAAAGAATGCGTCCTCAATCAAAGTTGAAGGAGGAAAAAGAGGCAGAGATGAAAAAGTTAAAACATAATGTCAAAGGCACACCCTTACCTGCTTTTTACCGTGGTCAAAAAGTAGTGAAAAGTCGTCCAGAGAAGGGCGATGCTAAAACTTAG 1458 0.417 MGEFLVDETVLEDKMGESAASNPSLQVSVSFGRFENDSLSWERWSSFSPNKYLEEVEKCATPGSVAQKKAYFEAHYKKVAARKAELLAQEKQREKDSFGSQDQSGIDLSGNTDAELDVSTTQGSNEGVQQEQSSAEIHRTIVNDFAEQVAVSSDYQSSSVEVENKEPETRSHSHSFFQIYEPEDVCTKQEENPNIEAEDVKEISHVVYKETGKASEIEAKDVKLDHPKESKVKSVNRVSNAVKTKKKSELPTAKAPQISTPRSSKPAPTPTKTVTPTSSTKKGNSPSLTRRQIASSGESRKVANKSLHMSMSLAPSNPDPAPHTTMRRSLIMEKMGDKDIVKRAFKTFQNSFNQQKSSGEDRSLIKKQVPSRGTVSKVPTSTALRKENGRPTKVESLDKSGNVVRNTLGPKSNIRAEKGKESSRKIEEKSNTKGVERMRPQSKLKEEKEAEMKKLKHNVKGTPLPAFYRGQKVVKSRPEKGDAKT 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00760 485 MobiDBLite consensus disorder prediction 369 387 - -
Cca06g00760 485 PANTHER F3I6.9 PROTEIN 1 480 - -
Cca06g00760 485 MobiDBLite consensus disorder prediction 211 233 - -
Cca06g00760 485 MobiDBLite consensus disorder prediction 101 135 - -
Cca06g00760 485 MobiDBLite consensus disorder prediction 414 458 - -
Cca06g00760 485 MobiDBLite consensus disorder prediction 184 198 - -
Cca06g00760 485 MobiDBLite consensus disorder prediction 253 323 - -
Cca06g00760 485 MobiDBLite consensus disorder prediction 211 325 - -
Cca06g00760 485 MobiDBLite consensus disorder prediction 155 198 - -
Cca06g00760 485 PANTHER F3I6.9 PROTEIN 1 480 - -
Cca06g00760 485 MobiDBLite consensus disorder prediction 352 485 - -
Cca06g00760 485 MobiDBLite consensus disorder prediction 90 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00760 Cca-Chr6 20203349 20208522 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00760 - - gmx:100810690 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00760 06 20203349 20208522 Cca06g00760 06 20203349 20208522 ECH