Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00758 ATGCTTCCCCTCCGCCTAAGCGCCGTCGTCTCGTCCCTCATTCTCTGCTTCCTCCTCCCCCCCTTCTGCCTCGGAATCCGCTCCTTTCCGACCACCGAAGACGGCGGCCACCGCTACGCGGAGGCCCCGGATTACCGCAACGGCGCCGGCTGCCCCGCCGCCTCCTCCGGGCACTCCCTCCTCCCCTCCTGCGACCCCTCTCTGGTCCACATCGCCATGACCCTCGACTCCGGCTACCTCCGCGGCTCCATCGCCGCCGTCCACTCCGTCCTCCGCCACTCCTCCTGCCCGGAAAACGTGTTCTTCCACTTCGTGGCCGCCGAGTTCGACCCGGCAAGCCCCCGGGTCCTGACCCGACTCGTTCGCTCCATCTTCCCCTCTCTGAACTTCAAAGTTTACATCTTTCGCGAAGACACAGTGATAAACCTAATCTCCTCTTCAATCCGACAAGCCCTGGAAAACCCCTTGAACTACGCGCGCAACTACCTCGGCGACATGCTGGACCCCTGCGTGGACCGCGTGATCTACCTCGACTCCGACGTGGTCGTGGTCGACGACGTACGCAAGCTCTGGCGCGTGGCACTCGCAGGGTCGCGCGTGATCGGCGCGCCGGAGTATTGCCACGCGAACTTCACCAAGTACTTCACGGACGAGTTCTGGAACGACCCCGTTTTGTCGCGCGTGTTCGCGTCTCGGACCCCGTGCTACTTCAACACGGGGGTGATGGTGATGGACTTGGTGAGGTGGAGAGAGGGGAACTTTAGGAAGAAAATCGAGAACTGGATGGAACTCCAGAGGAAGAAGAGGATTTACGAGTTGGGGTCTTTGCCTCCTTTTTTGCTTGTTTTTGCGGGCAATGTTGAGGCTATTGACCATCGGTGGAACCAGCATGGGCTTGGTGGGGACAACGTCAATGGTGTTTGTAGGTCCCTTCATCCTGGGCCTGTCAGTTTGTTGCATTGGAGTGGTAAGGGCAAGCCTTGGGTTAGGCTTGATGACAAGCAGCCTTGTCCTTTGGATCGTCTTTGGGAGCCTTATGATTTGTATAAGCCCAAGCAACTCAGGGATGATACGGTTAGGGATCAGAATTGGGGTTTCTCTTCTTCTATTTTGGTTGGTTatgctcatgatttgttatga 1140 0.5737 MLPLRLSAVVSSLILCFLLPPFCLGIRSFPTTEDGGHRYAEAPDYRNGAGCPAASSGHSLLPSCDPSLVHIAMTLDSGYLRGSIAAVHSVLRHSSCPENVFFHFVAAEFDPASPRVLTRLVRSIFPSLNFKVYIFREDTVINLISSSIRQALENPLNYARNYLGDMLDPCVDRVIYLDSDVVVVDDVRKLWRVALAGSRVIGAPEYCHANFTKYFTDEFWNDPVLSRVFASRTPCYFNTGVMVMDLVRWREGNFRKKIENWMELQRKKRIYELGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVNGVCRSLHPGPVSLLHWSGKGKPWVRLDDKQPCPLDRLWEPYDLYKPKQLRDDTVRDQNWGFSSSILVGYAHDLL 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00758 379 SUPERFAMILY Nucleotide-diphospho-sugar transferases 69 354 IPR029044 -
Cca06g00758 379 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 70 344 IPR029044 -
Cca06g00758 379 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 9-RELATED 9 358 - -
Cca06g00758 379 Pfam Glycosyl transferase family 8 70 330 IPR002495 GO:0016757
Cca06g00758 379 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 9 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00758 Cca-Chr6 20198213 20200426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00758 7 368 Glycosyltransferase AT1G70090 72.727 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00758 - - vra:106762685 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00758 06 20198213 20200426 Cca06g00758 06 20198213 20200426 ECH