Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00755 ATGTCCTCGCGGATCACGCGGCCGCCGTTCTCCGCCGCGTTCCTGCGGCCGCTCTTGGACGCGCTGGCGCAGGAGCAGGACGCCAACGCGCAGATCGGCGCTGCGCTGTGCCTCGCGGCGGCGGTCGAGGCGGCGCCGGACCCCGACGCGGAGGCGCTCCGTCGCAGCGCGCTGCCGCGGCTCGGGAAGCTCGTGAAGAGCGACGCGTGCAGGGCGCGCGCGGCGCTGCTGGTGCTGATCGGAAGCGTGGTCGCCGCCGGCGGCGCGTCGAGCCGCGGCGCGATGAACTGGCTCGTGCCGTGCCTCGTGGAGTTCCTCGGCAGCGAGGATTGGACGGTGAGGAAGGCCTCGGCGGAGGCGCTGACGAAGGTGGCTTCGGTGGAAAGAGATTTAGTGTCGCAGCATAAGGTTTTGTGTTTGGATTCATTGCAGAATCGGAAGTTCGATAAGATCAAAGTAGTTCGGGAGACTATGAATCGTGCTTTGGAGAAGTGGAAGGAGGTAACTGAGGACGCTCATGCTTCGATCAAGTCTGAATGTGCTTCTGTTGGCACAGATGACAGTAACAGCCGGAGTGTTACTAAGAGTTCACCTAGTGTTGGCTCTAAGTCGTCTAAAACAGTCCCCGCCAACAGGTCCCCTCCATCTGTGGTTTCGTTCATGTCCTCCATAAAAAGAGAGAGTTCTCTGAAGAGTAATGAGAAGAATTCGAGAATGGGGACATTGCATCAGCAGGATCATGAGAAATTCTCAGATGAGAAACTCGAAATTCCATTTTCAAGGTTCTCCCACTCAAACATGTCTATGGACGATGATATTAAAAGGTGTGATTTCAAAGTTTCTAAGTCAACCCAACATCAAAATGGGGTAAATTCAAGGGCAGAGATAAAGCGTGTTCTCTTTAGCAAGACCACTGATGAAAAAGTGAGAAGATTAGGTGGTTCCAAATCTCGTGTGGTTCCATATTATGCTGCTGATGATGATGTTGACGCAGATGTTTTAGCCAACGATGCAAATGAGATTTGTGAGAGCCCACAAGATGTTGAGGACTTCTCTTTGATCCGTGAACAACTTATTCAAATTGAAAACCAACAATCAAATCTGTTAGACCTCCTCCAGAGATTTATTGGAAGCTCCCAAAGTGGTATGAATTGTCTGGAGTCACGTGTACATGGCCTAGAGATGGCCCTGGATGAAATATCATATGATTTGGCAGTTTCAAGTGGCAGAATTTCCAATACTGATGCCACAGGTGACACATGTTGCAAGCTACCCGGTAGTGACTTTTTGAGTTCTAAATTCTGGAAGAAGACAGAAGGTCGGTATTCCACGTCAAGGCTCCCTTTAGGAAGCACAGCATCAATAAATGCTATGCATAATGCAACCGATAAAGATGGAAGCAAAGAAATATTAACTTCAAATAACAATAGATTGCAGCATGGTAAGGGTGGATATTTTATGAACCCATTGGCAGAAGTTCAAAGCGATATGAAAGGGAATTTAGGCCATCATACGTATAAAATGTCTAAAAACATGGTCCAAGACGCAGCGAGAGGACAAAGTGAAAACGCCGGCGTATATGATGCCATTCAACCAGCTAGGGAAGGACTGAGGAACCAGAAAGTCAGGTCATCCGTGTAG 1641 0.4966 MSSRITRPPFSAAFLRPLLDALAQEQDANAQIGAALCLAAAVEAAPDPDAEALRRSALPRLGKLVKSDACRARAALLVLIGSVVAAGGASSRGAMNWLVPCLVEFLGSEDWTVRKASAEALTKVASVERDLVSQHKVLCLDSLQNRKFDKIKVVRETMNRALEKWKEVTEDAHASIKSECASVGTDDSNSRSVTKSSPSVGSKSSKTVPANRSPPSVVSFMSSIKRESSLKSNEKNSRMGTLHQQDHEKFSDEKLEIPFSRFSHSNMSMDDDIKRCDFKVSKSTQHQNGVNSRAEIKRVLFSKTTDEKVRRLGGSKSRVVPYYAADDDVDADVLANDANEICESPQDVEDFSLIREQLIQIENQQSNLLDLLQRFIGSSQSGMNCLESRVHGLEMALDEISYDLAVSSGRISNTDATGDTCCKLPGSDFLSSKFWKKTEGRYSTSRLPLGSTASINAMHNATDKDGSKEILTSNNNRLQHGKGGYFMNPLAEVQSDMKGNLGHHTYKMSKNMVQDAARGQSENAGVYDAIQPAREGLRNQKVRSSV 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00755 546 ProSiteProfiles HEAT repeat profile. 98 136 IPR021133 -
Cca06g00755 546 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 1 524 IPR033337 GO:0005874|GO:0008017
Cca06g00755 546 Pfam HEAT repeat 98 126 IPR000357 GO:0005515
Cca06g00755 546 MobiDBLite consensus disorder prediction 180 248 - -
Cca06g00755 546 PANTHER TORTIFOLIA1-LIKE PROTEIN 4 1 524 - -
Cca06g00755 546 Gene3D - 3 243 IPR011989 -
Cca06g00755 546 Coils Coil 354 374 - -
Cca06g00755 546 MobiDBLite consensus disorder prediction 181 227 - -
Cca06g00755 546 SUPERFAMILY ARM repeat 12 165 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00755 Cca-Chr6 20118487 20123073 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00755 - - ccaj:109801391 976.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00755 06 20118487 20123073 Cca06g00755 06 20118487 20123073 ECH