Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00745 ATGGCAGGAGCAACTGCACCTACAGCAACGTTAATCAATCTCACGCGCCCTTCACACTCCAAACTTCACCACTTCTCTGCACACAATGTTCCCTTCCATAACCAACCCTTTTCTTCCGTTTTCTACCTCCGTCTAAAGCCCACAATCACCAATTGCCATGGCAAGCTGAATAGCTCGGGTGGGGGAGAGGCATATGTGATGGATGAAGCGGGTTTTGATGAGTATGATGGAATTGATGACGAAAGTGATGAGGATGATGCAGAGAGTAGCGTGGATTTGTTGATCAGATTCTTGCAGAGCATGTTTAAGAAAGTGTCTAAGCGAGCCAAGAAGGCCTCTCGCTCTGTCTTGCCCACAGTAATATCGCCCCAGCTAGTTTCTTTTGCTGTTGATGGGACTCTGCTACTTGCTTCACTTTCTGTTGTCAAAGCACTGCTTGAGGTCATCTGCACTCTTGGAGGTACTGTATTTGCTGCAATTCTGGTCCTGCGTGTGATTTGGGCAGCAGTTTCTTACTTTCAGTCAAGTGGGAATAGCTTCAATCAAGGGGGGAATTCCTTTGGTGCTGTAGCCTAA 576 0.4722 MAGATAPTATLINLTRPSHSKLHHFSAHNVPFHNQPFSSVFYLRLKPTITNCHGKLNSSGGGEAYVMDEAGFDEYDGIDDESDEDDAESSVDLLIRFLQSMFKKVSKRAKKASRSVLPTVISPQLVSFAVDGTLLLASLSVVKALLEVICTLGGTVFAAILVLRVIWAAVSYFQSSGNSFNQGGNSFGAVA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00745 191 PANTHER ATP PHOSPHORIBOSYLTRANSFERASE REGULATORY SUBUNIT 1 189 IPR039324 GO:0009787|GO:0010100
Cca06g00745 191 PANTHER PROTEIN SHORT HYPOCOTYL IN WHITE LIGHT 1 1 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00745 Cca-Chr6 19962159 19965674 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00745 - - gmx:100785194 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00745 06 19962159 19965674 Cca06g00745 06 19962159 19965674 ECH