Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00742 ATGGGAGCGTGTGTTTCAACTCCACGAGGGTGTGTGGGAGGGGGGTTGAGCTCTTCCAAGAGGAAAACCAGAAAGAGGAGGAGAGAGGGACTCAGGAGAAGGGTTGCTTCTCGGTTGCGTAAAGAATCATTGGAGAAGGTTGATGAGGCAGCAGGCTTGCCTGATTGTTCCTTTGCCAACCCCACTTTCCAAGGCAGTATTGAAGAGGCGTGGTTTGATTCGGTTGCAGTATTTGATTCTGACTGTGATGATGATTACCAGAGTGTTCCCGATGATGTTGTATCTCTAAGTGGGATTGAAGGTGGATCTGTATCAAGTTTTCCATCTTCAAGAGATGCCAACCATGGAGTTTCAACAGATCAGGTTCAGAAACAGAAGGAGTTATCGGCAGGATATTCTGCTAATATCTCTGAGGTGGCGAGAAGTTCAGATGTTCAATATTTTGGTGTAGAGGTCATTGATTCTCAACGTGAGCCTGTGTTCCTTGATGAAATTTCTTCAGTTGATGCGAACTCCAACAAGGATGATGGACTTTTGGATAATTGTGGGATTCTTCCAAACAATTGTTTGCCATGTCTTGCATCTACCATTCCTTCTCTTGAAAAGAGAAGATCATCAAGTTCTAGTCCTCCTCCTAATGCTAGGAAGAAGACTCCTACGAAACTTGCCTTTAAATGGAAAGAAGGACATGGGAATGCTACTCTATTTTCCTCAAAGTCATTTCTACAAAGACCAATTGCAGGTTCTCAAGTACCTTTTTGTCCAATTGAGAAGAAAATGCTTGATTGTTGGTCACAAATTGATGCTAGCACTTTCAAAGTTCGAGGAGTAAATTATTTCAAGGACAAGAAGAAGGACTTTGCTCCTAACTATTCTGCATATTACCCATTTGGTGTAGATGTTTTCTTGTCTCCACGGAAAGTTGATCATATAGCTCGGTTTGTGGAACTTCCTGTTATTAGTTCGTCCGGGAAATTTCCTCCCATACTAGTTGTAAATGTTCAGGTTCCACTCTACCCTGCCACACTTTTTCAAGGTGAAACTGATGGAGAAGGAATGAGCATTGTTTTGTACTTTAAACTTTCGGAAAGTTACTCCAAGGAACTTCCACTGACTTTACAAGAAAGCATCAGAAGATTAATGGACGATGAAGTTGAAAAGGTAAAGGGTTTTCCTGTAGATACAATTGCACCCTTCCGGGAAAGGTTGAAAATATTGGGCCGTGTTGCCAACCTCGAAGATCTTCACTTGAGTGCAGCAGAAAGGAAGCTTATGCAGGCTTACAATGAGAAACCTGTTCTTTCACGTCCCCAACACGAGTTTTACACGGGAGAAAATTACTTTGAGATTGACTTGGATATGCATAGATTCAGCTATATCTCCAGGAAAGGGTTTGAAGCTTTTCTTGATAGGTTAAAGATTTGCACTCTAGATGTTGGCCTCACAATTCAGGGGAACAAACAAGAGGAGCTGCCAGAGCATGTGTTATGTTGTATTCGATTAAACGGCATTGACTACACGAATTACCAACAACTGGGGCTAACTCATGATCCCCTCTAA 1560 0.4218 MGACVSTPRGCVGGGLSSSKRKTRKRRREGLRRRVASRLRKESLEKVDEAAGLPDCSFANPTFQGSIEEAWFDSVAVFDSDCDDDYQSVPDDVVSLSGIEGGSVSSFPSSRDANHGVSTDQVQKQKELSAGYSANISEVARSSDVQYFGVEVIDSQREPVFLDEISSVDANSNKDDGLLDNCGILPNNCLPCLASTIPSLEKRRSSSSSPPPNARKKTPTKLAFKWKEGHGNATLFSSKSFLQRPIAGSQVPFCPIEKKMLDCWSQIDASTFKVRGVNYFKDKKKDFAPNYSAYYPFGVDVFLSPRKVDHIARFVELPVISSSGKFPPILVVNVQVPLYPATLFQGETDGEGMSIVLYFKLSESYSKELPLTLQESIRRLMDDEVEKVKGFPVDTIAPFRERLKILGRVANLEDLHLSAAERKLMQAYNEKPVLSRPQHEFYTGENYFEIDLDMHRFSYISRKGFEAFLDRLKICTLDVGLTIQGNKQEELPEHVLCCIRLNGIDYTNYQQLGLTHDPL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00742 519 MobiDBLite consensus disorder prediction 105 124 - -
Cca06g00742 519 MobiDBLite consensus disorder prediction 19 34 - -
Cca06g00742 519 MobiDBLite consensus disorder prediction 1 35 - -
Cca06g00742 519 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 264 505 IPR009769 -
Cca06g00742 519 PANTHER CW14 PROTEIN 1 517 - -
Cca06g00742 519 PANTHER - 1 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00742 Cca-Chr6 19914259 19919520 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00742 - - gmx:100787325 922.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00742 06 19914259 19919520 Cca06g00742 06 19914259 19919520 ECH
Cca06g00742 06 19914259 19919520 Cca06g00742 06 19914259 19919520 PCT