Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00738 ATGGACCATAGCTACCcttcacttcctcttctctccattttccttctcttgcttcctcccctgatctcatctcAAATCTGCCAGAGAAACTGTGGCAAAGAGACTCTCAAGTACCCTTTTGGCAGTGGCCCTGGTTGTGGCGACCCTCGCTTCCAACCACACGTGTCATGTAGCCAACAAAAGCTCACTTTCACCACTCACACAGGCTCCTACCCTGTGACCTCAATTGACTACACCAACCAAGTCATACACATCTCAGATCCCACCATGTCAACATGCTCTTGCACTGTCCCTAGCAAAGGCTTTGGCTTAAACTGGGACGCACCATTTACTTTTGCTGAAAGCACCATCTTTGCTCTAGTAGACTGTGCAATGAACTCATCATCTATATGCAAATCAAGTGGCTACGATGATGGGAACAATTCTAACCTTCTTTGTGATCAAGGCTCACCAATTTGTAGTCTTCTGTATTCATGCAGGCCTATTAGTACTATCAACCTTCCAATCTCCACATGCTGTGTTTACACGCCAGTTAATCTTGGACCATCGTTTGAAATGGATCTGCAGAAGCTGCAATGCCCTTCGTACACGGGCTTTTACAACTTCAATGATCAACAATCGGATCCTGAAAAGTGGAATTATGGAATAGCACTTAAGTACAAGTTTAGTGTCACAAATGACTATCCTACTTCCTGTGCTGCTTGTGAAAGGAGCTATGGAGTGTGTGGGTATACTGGTGCCTATAACTCGTTTATCTGCAACTGTCCTAATGGGATTAACACAACAACGGATTGTTTCTTCACATCATCTTATAATGCTGGTTTTAGAAAGGGGGTTGCTTGGTTGATCTATCCTGTGGTATGGTCTCTAGTTTGGTTCTTCTTGTGA 888 0.4122 MDHSYPSLPLLSIFLLLLPPLISSQICQRNCGKETLKYPFGSGPGCGDPRFQPHVSCSQQKLTFTTHTGSYPVTSIDYTNQVIHISDPTMSTCSCTVPSKGFGLNWDAPFTFAESTIFALVDCAMNSSSICKSSGYDDGNNSNLLCDQGSPICSLLYSCRPISTINLPISTCCVYTPVNLGPSFEMDLQKLQCPSYTGFYNFNDQQSDPEKWNYGIALKYKFSVTNDYPTSCAACERSYGVCGYTGAYNSFICNCPNGINTTTDCFFTSSYNAGFRKGVAWLIYPVVWSLVWFFL 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00738 295 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 10 291 - -
Cca06g00738 295 Pfam Wall-associated receptor kinase galacturonan-binding 27 87 IPR025287 GO:0030247
Cca06g00738 295 PANTHER WALL-ASSOCIATED RECEPTOR KINASE, GALACTURONAN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 10 291 - -
Cca06g00738 295 Pfam Wall-associated receptor kinase C-terminal 204 257 IPR032872 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00738 19 124 Receptor kinase-like Gene Family AT5G02070 31.532 2.72e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00738 - - gmx:100788392 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00738 06 19849970 19851840 Cca06g00738 06 19849970 19851840 ECH