Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00736 ATGCAAGAAGGTGTGAAATTGGAGGTCAGATGGGGATACAAGGTTTCAACTTCCTCTCAGGCCTGCGTTTCAGCCATCAACTCATACTACCATCAGGTTCTCAGCTATGGCAGAGAGAGGTCTGTGATTCTGGAAGCAGTGGCACATGACAAACACTGTGTTTTGGCCAACATCTTAGCAGCACATTTTCTTCACTCATCTGCTTCTTCTCGTTCTCTCACTTGTCTTGATGCTGCTAAGTCACACCTTGAACATGCCACCTTGTATGAGAAACTAGTTTTCGATTCCGTCAGTTATTTGCTATCTGAAGATAGAGACGATGATGTTGCTGTTGAATTGCATTCTAAGCTTCTAAAAGAGTTCCCAAGAGATCTGGTTTCTCTAAAGAGAGCACAAGTCATATGCTTCTACATGGGCCTGCCTGGTCTTTCTTTATCTCTTGTTCAACAGGTTCTACCTCAAAATGAAGGAGAAAATTACATATATGGCATGCTTGCTTTCCCTTTATTGGAGCTTGGACGAATGGAGGATGCTGAGAAAGCTGCCAGAAGGGGATTTGAAATCAATAAGCAAGACATCTGGGCACAGCATGCTTTATGTCATGTTCTTCAGTATAATTGCTTTTTTAAAGAAGCTGTTAAGTTCGTGGAAGAATGTTCATCATCATGGGGTTCTTCTTCATCTTTTATGTTGACACACAATTGGTGGCATGCAGCACTTTGTTATTTAGAAGGTAATGCTCCAAGGCAAAGAGTACTTGAGATATATGACAATTATATATGGAAGGAGCTAGACAAAAATGATTCTGTGACTGCAGAGGTTTACTTAAATGCTGCGGGTCTGCTTTTGCGGTTTTATGTACGTGGTGAATTGGATATTGTTGGTGATCGTCTCAAGATACTTGCAGAATGCTTAACTAATCAAGAAAACTGGTACCTAGAGTGGCACTTCGACGTATTAATAGTGTGGACTTTGGCAAAGACTGGAGAAATTTCTAAAGCAGAAGATCTTCTAAAGGGCTTAAAATACAGGATTTTGAGGATGACTAAAAAGAAACAACAACGAATGCAGAGAGGAATGATGCTTGCAGAGGCACTTTATGCATATGGAAGAGGTGACGACAGACATGGACTGGAATTACTTGATCCAGATTTTGATGCCACTGATTATAAGATCATTGGGGCATCAGATGAACAAGTCGATGTATTCAATGAAGTTTGGTATAACATGTTGCTGAATAGCGGAGAAGCGTTGAAGGCCATCGAAGTGTTAGAGAAGCAAATCAAGAAGAGAGATGGCGTCCCCTTCTTATGGCGTCTACTAGAGAGGGGATACAAACTAGCTAACAAGCCAGAAGAAGCAATCGCGAAGGAGAAGGCCACGGCTTTGGAGACTCGTTATTTTAATTGA 1410 0.4135 MQEGVKLEVRWGYKVSTSSQACVSAINSYYHQVLSYGRERSVILEAVAHDKHCVLANILAAHFLHSSASSRSLTCLDAAKSHLEHATLYEKLVFDSVSYLLSEDRDDDVAVELHSKLLKEFPRDLVSLKRAQVICFYMGLPGLSLSLVQQVLPQNEGENYIYGMLAFPLLELGRMEDAEKAARRGFEINKQDIWAQHALCHVLQYNCFFKEAVKFVEECSSSWGSSSSFMLTHNWWHAALCYLEGNAPRQRVLEIYDNYIWKELDKNDSVTAEVYLNAAGLLLRFYVRGELDIVGDRLKILAECLTNQENWYLEWHFDVLIVWTLAKTGEISKAEDLLKGLKYRILRMTKKKQQRMQRGMMLAEALYAYGRGDDRHGLELLDPDFDATDYKIIGASDEQVDVFNEVWYNMLLNSGEALKAIEVLEKQIKKRDGVPFLWRLLERGYKLANKPEEAIAKEKATALETRYFN 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00736 469 CDD StaR_like 49 408 IPR033891 -
Cca06g00736 469 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 38 9 467 IPR033891 -
Cca06g00736 469 PANTHER BNAA09G29550D PROTEIN 9 467 - -
Cca06g00736 469 Gene3D Tetratricopeptide repeat domain 28 457 IPR011990 GO:0005515
Cca06g00736 469 SUPERFAMILY TPR-like 106 456 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00736 Cca-Chr6 19828004 19834459 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00736 - - gmx:100803771 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00736 06 19828004 19834459 Cca06g00736 06 19828004 19834459 ECH