Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00733 ATGCAGACGTTAAGCTCCAACAAGTTCCGCACCGGCATGGACTTCTTCCACCGCGCCAAGGCGGTGCGCCTCCGGAGCCACCATGACAAGTACCTCCTCGCGGAGGACGACGAGGAGTCCGTCACGCAAGACCGGAGCGGCTCCTCCAAGAGCGCGCGGTGGCTTGTGGAGTACGTGCCGGAGTACGAAAACATAATTCGTCTGAAGAGCTGCTACGGCAAGTACCTCACCGCCTCCAACCAACTCTTCCTCCTCGGCATGACGGGCCACAAGGTGCTCCAGACGCTCCCGCCGCGCCTCGACTCCTCCGTCGAGTGGGAGCCCGTCAAGGACGGAGGCCGCGTCAAGCTCAAGACCCGCTACGGCAACTTCCTCCGCGCCAACGGCGGATTGCCGCCGTGGAGAAACTCCGTCACGCACGATATCCCGCACAGGACCGTCACGCAGGATTGGATCCTCTGGGACGTTGATGTTGTTGAGATTTATGTGGACTCGCCGGCTCATGGGAATAGACCCTCTGCTCCACCCTTGCCTGTCACGGACTCTGTTCACACATTGACCACCGCGCCGTCGCCGCCCACCGTGTCTGCTAGCTTTTCAAGGCAACAGACGAATGAATCACCGAAGGCGGAGGGGCGAACTATATACTACCATATTGCTGAAGACAATGGAGAGGTTCTGGATGAAGATGTGCAGGGGTATTCTTTGATTTTCAAAGGAAATGGAGTTGAAGATTTGACTCGAAAGTTTGAGGAAGAGACAGGGTTAGAGGGAATCATTGTGTGTAATCGGAGTCCTTTGAATAGAAAGCTTTATCCACTTCGCTTGCAGCTTCCTCCAAACACTGTGACCATGCGGGTTGTTTTGGTTCTTCCCATGTCAAAGGTGGCAAGGGACTTTGAGGCACAAGGCTTACTATGA 921 0.5581 MQTLSSNKFRTGMDFFHRAKAVRLRSHHDKYLLAEDDEESVTQDRSGSSKSARWLVEYVPEYENIIRLKSCYGKYLTASNQLFLLGMTGHKVLQTLPPRLDSSVEWEPVKDGGRVKLKTRYGNFLRANGGLPPWRNSVTHDIPHRTVTQDWILWDVDVVEIYVDSPAHGNRPSAPPLPVTDSVHTLTTAPSPPTVSASFSRQQTNESPKAEGRTIYYHIAEDNGEVLDEDVQGYSLIFKGNGVEDLTRKFEEETGLEGIIVCNRSPLNRKLYPLRLQLPPNTVTMRVVLVLPMSKVARDFEAQGLL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00733 306 SUPERFAMILY Actin-crosslinking proteins 17 159 IPR008999 -
Cca06g00733 306 PANTHER ACTIN CROSS-LINKING PROTEIN 9 303 - -
Cca06g00733 306 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 9 303 - -
Cca06g00733 306 MobiDBLite consensus disorder prediction 167 212 - -
Cca06g00733 306 MobiDBLite consensus disorder prediction 180 210 - -
Cca06g00733 306 Gene3D - 21 140 - -
Cca06g00733 306 Pfam Domain of unknown function (DUF569) 13 154 IPR007679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00733 Cca-Chr6 19789666 19794121 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00733 - - ccaj:109799838 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00733 06 19789666 19794121 Cca06g00733 06 19789666 19794121 ECH