Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00724 ATGGCGTCCACCGCAAGCCTCGACGTCGCCGACGGCCCCGTGATGAGCCTAATTAGCAAGCGCCTCCGCGCCCTCCGCAAGAAGCTGAACCACATCAACGCCATGGAGGACTCCGTTTCTCAAGGGAAGCCGCTCAACAAGGAGCAGGAGGAGGGCCTCCGCTCCAAGCCCTGCGTCCTCGCCCTCATCGACGAGCTCGAGAAGCTCCGCCAGCCTCTCGCCTCCGCACTCGCCGAGGAGCTCGAAGCCTCCGCCGCGCACACCCGCCGCGGCGCCGAAACCCTAGCCGAGAACTCCGGCTCCAGCGAGCCGCCGCCGCACTCGAACGACGCCGTTCTCGAGGACCTCCTCAACCTGCTCTACTTCGGCTCGCTCTTCGACGTTAAGAGCGACTTCGCCTCCACGATGCTCACCCGGACGCACGAGCGCGGCTGCTGCTTGACCTACGACTACGTCACCGACGACGCCACCGATCTGCTCGGCGAGAAGGACCTCGATTCGATCTCCGCCTTGCGCGCCCTTCTCGTTTCGCGCCCCGCCGATTCCAGCTTCTCGCACAAGAACGCGCTCCAGCGATGCGTGGAACACGCCAAGCTGTGGCTCGCCAAGTCCGAGCAGCCCATTGGACCTGATGCTGATGTCACTTATGCTGCATTGAGGGAGAAGTTGAATAAGATTATGTCTTCGGAGTACTTTACTACTACTCCTGAGATGAAGGCTTCGGTTGAAGTTGCTGCCGCGGCTGCTGGGGGGAATTACGTGTCTTTCCATGTGCCCGTGCATGGTTCTGTGGTTCCGGTTGAAGTCGAACAACCTGTTTTTCAGTCTCAGGAGAAGGATGAAGGAACCACAAATTTTCAAGGACATGGATCTGAAGATGACCAGTCTGATCCTGAAGAAGAGCTTCAGAAGGATGATGTAGAAGCAGAAAATGCAGGTGAGGTGGTGTCAGTTCAACATGAACAGACCAACCCACAAGGTGATGTAGATTATAATCAACGAGATGTAGAGGCCAAGGAGCAGCAGTCTTACCCCAGGCGGGGTTATCAGAACCATAGAggtggtcgtggtggaggtggtcgccggggctattcaaatggtcgtggaggtcgtggtggtggtggtggCAGAGGAGGCTACCAAAATGGCCGCAGTCAATACTATGATCAGCCTGGAAATTATTATCCAAGGAACTACTATAACAACAGAGGAAGAGGTGGCAGAGGTGGTGGCTATGCTTACAACAACCATGGGCCAGGTGGTCATGTGAATCATGTGGCAGGTGATGTGGGGGTGCAATGA 1302 0.5376 MASTASLDVADGPVMSLISKRLRALRKKLNHINAMEDSVSQGKPLNKEQEEGLRSKPCVLALIDELEKLRQPLASALAEELEASAAHTRRGAETLAENSGSSEPPPHSNDAVLEDLLNLLYFGSLFDVKSDFASTMLTRTHERGCCLTYDYVTDDATDLLGEKDLDSISALRALLVSRPADSSFSHKNALQRCVEHAKLWLAKSEQPIGPDADVTYAALREKLNKIMSSEYFTTTPEMKASVEVAAAAAGGNYVSFHVPVHGSVVPVEVEQPVFQSQEKDEGTTNFQGHGSEDDQSDPEEELQKDDVEAENAGEVVSVQHEQTNPQGDVDYNQRDVEAKEQQSYPRRGYQNHRGGRGGGGRRGYSNGRGGRGGGGGRGGYQNGRSQYYDQPGNYYPRNYYNNRGRGGRGGGYAYNNHGPGGHVNHVAGDVGVQ 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00724 433 MobiDBLite consensus disorder prediction 316 330 - -
Cca06g00724 433 Coils Coil 432 433 - -
Cca06g00724 433 MobiDBLite consensus disorder prediction 276 291 - -
Cca06g00724 433 PANTHER GLYCINE-RICH PROTEIN 1 427 - -
Cca06g00724 433 MobiDBLite consensus disorder prediction 275 389 - -
Cca06g00724 433 MobiDBLite consensus disorder prediction 87 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00724 Cca-Chr6 19676870 19683875 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00724 - - gmx:100819759 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00724 06 19676870 19683875 Cca06g00724 06 19676870 19683875 ECH