Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00722 ATGTCGGGTGCAGAAGATAAGGGAAAAACTGTTTCTCTCTCTTTTGGGTCACTTCTATGCTGTAGAAGTGGCTTTTCTTCAACTTCAAGTTCAACAACAGAAAAAGAAAAAAACAGTGATGAACTTAGCAAAAACAGTTCAGGATCAGCCAAGAAACCAGGAGGATGGAAGGCTATGCCTTTTATTTTAGGGAATGAAACGTTTGAGAGGTTTGCAGCATTTGGTTTGTTTGCTAACTTCATGGTGTATTTGACAAGAGAGTTTCATTTGGATCAAGTTTATGCTTCAAACATTCTCAACATATGGAGTGGTATTACCAACTTTTTCCCTTTGATTGGCGCCTTCATTTCTGATGCATATATTGGTCGCTTTCGGACTATAGCCTTTGCTTCCTTTTCTTCACTCCTGGGGATGACCGTGGTGACTTTAACCGCGTGTTTAGCACAGTTGCATCCTCCACCATGCAGTCCTGAACAACAAGCACTGAACCAATGTGTTAAAGCCACCACACCCCATGTGAGTGTTCTTCTTACGGGGCTTTGCCTTTTGAGCATAGGCTCTGCTGGCATAAGGCCATGTAGCATCCCCTTTGGTGTCGACCAATTCGATGCCACCACAGATGAAGGGAAGAAAGGGATCAACAGCTTCTTCAATTGGTACTACACCTCTTTCACAATTGTGTTGTTGATCACTCAAACAGTGGTTGTGTACATCCAAGACTCCATTAGTTGGAAGATAGGTTTCGCCATCCCAACCGTGTGCATGTTTTGCTCCATCATCTTGTTCTTCGTGGGAACAAGGATCTACGTGCATGTGAAGCCTGAGGGAAGCATTTTCTCTAGCATTGGGCAAGTTCTAGTGGCTGCTTATAGAAAGCGAAAATTTGAGCTTCCGAGTGGGAAGCAAGTTGATGGGGTTTTCTATGATCCTCCACTTAGTGGGACTCAGATTTTGTCAAAGCTTCCGTTCACCAACCAATTCCGGACTTTGAATAAAGCAGCTATAATAATGGAGGGGGAACTAAACCAAGATGGGAGTAGGGTAAATGAGTGGAAACTTGTGAGCATCCAGCAAGTGGAAGAGGTTAAATGTTTGGCAAGAATTTTCCCAATCTGGGCTGCTGGGATCCTTGGTTTCACTTCCATGGCCCAACAAGGAACATTTACTATCTCACAAGCACTGAAAATGGACAGGCACCTAGGACCCAAATTCCAAATCCCACCTGGCTCACTTTCAGTCATATCATTCATGACCATAGGTTTGTGGGTCCCATTCTATGACAGAGTCATGGTGCCAGCACTCAGAAGAGTCACTAAGCATGAAGGGGGCATCACTCTCCTCCAGAGAATTGGAATTGGCATGGTGTTCTCCGTTCTGTCCATGATTGCTGCTGCATTAGTGGAGAAAGTGAGAAGAGATTTGGCAAATTCAAATCCAAATCCAAATCCTTTGGGCATTGCCCCCATGTCAGTCCTGTGGCTGGCTCCACAATTAGTCCTTATGGGCATGTGTGAGGCCTTCAATATAATTGGACAAATTGAGTTCTACAACAGGCAATTTCCTGAGCACATGAGAAGCATTGCTAATGCCTTGTTCTCATGTTCTTTTGCTGGGTCTAGCTATGTTAGCAGTGCAATAGTCACTGCTGTTCATCATGCCACTAGAACACATAGCCATCCAGATTGGTTGACCAATAATATCAATGCTGGCAGACTGGACTACTTTTACTATCTCATAGCAGGAATTGGAGTCCTCAACTTGATTTATTTTCTCTATGTGGCTCAAAGGTATCATTACAAGGGAAGTGTTGACCTCCTAGATAAAGCTCAAGATATGGAGTTAGCTTCAAAAGGAGAATTAGATTACTATAGTGCTAGGTATGAAGATTCTAAATAA 1896 0.4335 MSGAEDKGKTVSLSFGSLLCCRSGFSSTSSSTTEKEKNSDELSKNSSGSAKKPGGWKAMPFILGNETFERFAAFGLFANFMVYLTREFHLDQVYASNILNIWSGITNFFPLIGAFISDAYIGRFRTIAFASFSSLLGMTVVTLTACLAQLHPPPCSPEQQALNQCVKATTPHVSVLLTGLCLLSIGSAGIRPCSIPFGVDQFDATTDEGKKGINSFFNWYYTSFTIVLLITQTVVVYIQDSISWKIGFAIPTVCMFCSIILFFVGTRIYVHVKPEGSIFSSIGQVLVAAYRKRKFELPSGKQVDGVFYDPPLSGTQILSKLPFTNQFRTLNKAAIIMEGELNQDGSRVNEWKLVSIQQVEEVKCLARIFPIWAAGILGFTSMAQQGTFTISQALKMDRHLGPKFQIPPGSLSVISFMTIGLWVPFYDRVMVPALRRVTKHEGGITLLQRIGIGMVFSVLSMIAAALVEKVRRDLANSNPNPNPLGIAPMSVLWLAPQLVLMGMCEAFNIIGQIEFYNRQFPEHMRSIANALFSCSFAGSSYVSSAIVTAVHHATRTHSHPDWLTNNINAGRLDYFYYLIAGIGVLNLIYFLYVAQRYHYKGSVDLLDKAQDMELASKGELDYYSARYEDSK 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00722 631 PANTHER PEPTIDE/NITRATE TRANSPORTER 43 608 - -
Cca06g00722 631 CDD MFS_NPF1_2 59 597 - -
Cca06g00722 631 Gene3D MFS general substrate transporter like domains 27 603 IPR036259 -
Cca06g00722 631 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 43 608 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca06g00722 631 MobiDBLite consensus disorder prediction 24 53 - -
Cca06g00722 631 Pfam POT family 124 556 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca06g00722 631 SUPERFAMILY MFS general substrate transporter 70 595 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00722 Cca-Chr6 19653992 19660145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00722 51 620 Organic Solute Cotransporters AT1G69870 60.696 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00722 - - gmx:100815154 1078.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00722 06 19653992 19660145 Cca06g00722 06 19653992 19660145 ECH