Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00717 ATGGAAGTAGAAGCTCCCCAGGTTAGCACATGGGAAGGGTATGTGAACTGGAGGAACAAACCTGCTCTCAGAGGACGCCATGGAGGCATGCTTGCAGCCTCCTTTGTTCTGGTGGCGGAGATATTGGAGAATCTAGCGTTTTTGGCGAATGCGAGCAACTTGGTTTTGTACCTGAAGCAGTATATGCATATGTCTCCTTCGAAATCTGCTAACAATGTCACCAATTTCATGGGAACAGCTTTTCTTCTTGCTCTCCTCGGTGGTTTCTTATCTGATGCCTTTTTCACCACTTATCGTGTCTACCTCATAAGTGCACTTATCGAGTTCCTGGGTCTGATTGTACTAACTATACAAGCTCGTGATTCTTCATTAAAGCCACCGATGTGTGACCAAGATACCTCGTGTCAAGAAGTTAATGGTGGCAAAGCAGCAATGTTATTTGCTGGCCTCTATTTGGTGGCTCTAGGGGTTGGAGGAATAAAAGGGTCTTTGCCAGCACATGGTGGTGAGCAATTTGATGAAGCCACACCATCCGGAAGGAAGCAAAGATCAACCTTCTTCAACTACTTTGTCTTCTGCCTATCATGTGGTGCCCTTATTGCAGTGACTTTTGTAGTGTGGATTGAAGACAACAAAGGGTGGCAATGGGGTTTTGCAATATCTACCATTAGCATATTTGTATCTATCCCAGTTTTCTTGGCTGGTTCAGCTACTTACAAGAACAAGATCCCTTCAGGAAGTCCACTTACCACCATTTTAAAGGTTCTTATTGCTACTTTACTGAACAGTTGCACCTACAAAAATACAAGCAGTGCTGTTGTGAATATGGCTTCAAGCCCTTCTAATTCACACTTTGGTAGAATAGAGTTAAATCAAGAAACTGTAAAAGATAGCACAACAACTGAAACACCAACAAGGCAACTCAAATTTCTTAATAAAGCAGTTACAAACAAGCCAAGGTATTCATCACTAGAATGCACTGTACAAGAAGTAGAAGATGTCAACGTAGTACTGAAAGTACTGCCCATATTTGCTTGTACCATCATTCTTAACTGTTGCCTAGCTCAATTGTCCACATTCTCTGTTGAACAAGCTGCTACTATGAACACTAAGCTTGGTTCCCTAAAGGTGCCACCATCTTCATTACCCATTTTCCCAGTGGTGTTCATCATGATCCTAGCACCAATTTATGACCACATTATCATACCCTACTCTAGGAAAGTGACCAAATCAGAAATGGGCATCACTCACCTCCAAAGGATTGGATTTGGATTAGTACTTTCCATAATTGCCATGGCAGTGGCTGCTCTTGTTGAAATCAAAAGGAAAAGGGTGGCCACTCACTCAGGCCTACTTGATGATCCAACCAAACCACTACCAATCACATTCTTATGGATTGCTTTTCAATACTTATTCCTCGGATCTGCTGATCTTTTCACCTTGGCTGGATTGTTGGAGTTTTTCTTCTCAGAAGCACCAATAAGGATGAGATCTTTGGCCACATCTCTTTCTTGGGCCTCTTTGGCAATGGGGTACTACCTAAGTTCAGTGATTGTATCTATAGTAAACAGTGTCAGTGGAAACAGTACCCACAAACCATGGCTAGATGGTGCCAACTTCAATGACTATCACCTAGAGAGGTTTTATTGGCTCATGTGTGTCTTAAGTGGGTTGAACTTCCTACATTACCTTTATTGGGCTACCAGGTACAAATATAGAGGGTTGGGTACCACTAATGAATGA 1743 0.424 MEVEAPQVSTWEGYVNWRNKPALRGRHGGMLAASFVLVAEILENLAFLANASNLVLYLKQYMHMSPSKSANNVTNFMGTAFLLALLGGFLSDAFFTTYRVYLISALIEFLGLIVLTIQARDSSLKPPMCDQDTSCQEVNGGKAAMLFAGLYLVALGVGGIKGSLPAHGGEQFDEATPSGRKQRSTFFNYFVFCLSCGALIAVTFVVWIEDNKGWQWGFAISTISIFVSIPVFLAGSATYKNKIPSGSPLTTILKVLIATLLNSCTYKNTSSAVVNMASSPSNSHFGRIELNQETVKDSTTTETPTRQLKFLNKAVTNKPRYSSLECTVQEVEDVNVVLKVLPIFACTIILNCCLAQLSTFSVEQAATMNTKLGSLKVPPSSLPIFPVVFIMILAPIYDHIIIPYSRKVTKSEMGITHLQRIGFGLVLSIIAMAVAALVEIKRKRVATHSGLLDDPTKPLPITFLWIAFQYLFLGSADLFTLAGLLEFFFSEAPIRMRSLATSLSWASLAMGYYLSSVIVSIVNSVSGNSTHKPWLDGANFNDYHLERFYWLMCVLSGLNFLHYLYWATRYKYRGLGTTNE 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00717 580 Gene3D MFS general substrate transporter like domains 3 576 IPR036259 -
Cca06g00717 580 SUPERFAMILY MFS general substrate transporter 35 572 IPR036259 -
Cca06g00717 580 PANTHER PROTEIN NRT1/ PTR FAMILY 4.6-LIKE 13 575 - -
Cca06g00717 580 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 13 575 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca06g00717 580 Pfam POT family 99 534 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca06g00717 580 CDD MFS_NPF4 30 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00717 Cca-Chr6 19401142 19407913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00717 1 577 Organic Solute Cotransporters AT1G69850 72.696 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00717 - - gmx:100801999 1036.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00717 06 19401142 19407913 Cca06g00717 06 19401142 19407913 ECH