Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00714 ATGAATTTTTTGATGCGGTCTACGACGGGCGTGTACGGAGAGCGTTCGGCGATTCCGCTTCCGGAGCCTCGTGCTGATGCGCATCATAATAGGTCTGCATCCGCTGGATCTTCTTTGGAGACTCTCGTGTCTGATGATCCATATGCACGCCATGATGCTGAGGTTGATCGCGGCATGATCAATAAGCACGTGGATGTTGCCGAGGATGAAGGATGGATTACCATTCCGTGCAAGGTACTTCCTGAAAACTGGAATTGTGCACCAGATATACAGTCTCTGCACTCCCTTGACCGTTCCTTTCTTTTACCTGGTGAACAAGTTCATATCTTGGCATGCTTGTCTGCATGTAAGCAGGATACATCTTCATTTAAAGTTGCAGCAGCAACGAGTGAGAATGACACAGGTCACAGCCCCAAGAAAGAAAATGGAACCATTGAAAACAGAAATAATGCAGTGTCTGGAGAAGGGGAACTAGGTACCAGTGTTGAAGAGCAGCTGGAAGATGTTTCGGATGGTGAATCCCTTGTTCAAAAAGAGATTCTCAAAAAACAAACTGCATTATTGTTGCAAAAGTTTGAAAATTCTCACTTCTTTGTGAGGATTTCTGAGTCCAATGATCCCCTTTGGTCCAAAAGAAGCTCTTCAGAAGTTGTTTCCAACTCTTCTGATGCAAATAATGGAAAGGCCTCAACAATCAAATCTGAAGAGACTTCATTGTCTTCTATTAGTGCCGTTATTGATAGAGGAAGTTTTGATTCAAATGTTTCTGGTGGAGTGGCAAGAAATTCTGTGAAGTGTTGTGCTTTACCTAATGGAGACATAGTGGTTCTTTTACAGGTGAATGTTGGTGTTAATTTTCTTTCAGATCCTTGTATAGAAATTCTTCAATTTGAAAAGCATCAGGAGAGAAGGTCATCTTCTTTCAGCAAGGTGGATCCAGTTTATACAAATCAGGATTCGTGTGTGGAGCTGTTAAATTGGATAATTCCATTGGATAGTGGGAAACCTTCTAATTGCCCACCATCCCCTTCTCATTTAACTTCAACTTCGGGATATGGTAGCTCCTCTCAGAGATCCAACATTTCTGGATCATCTAGCTCTCAGTTATTCTCCTTTAGCAATTTCAGAAGTTACTCCATGTCATCAATACCACAAACTATGACCACTCCGGCTGCTCCTGTTAAAGCAGCTAGTTCTAAGCCAGATTTTGACTTTGAGGAGTGGGATCAAATATCATCTCAGAAATATTTACGGAAAAAAAGGGGGGTGGAAGGACTTTTATCTTTTCGAGGTGTTTCATTGGAACAAGATAGATTTTATGTTTGTTGTGGATTAGAAGGCATATATACACCAGGAAGAAGATGGAGAAGGAAACTTGAAATAATACAACCCATACACATTCATTCTTTTGCTGCCGACTCCAATTCAGATGATCTTCTGTGTGTTCAGATAAAGAATGTTGCTCCTACACATGCTCCAGATATTGTGATATTTATAGATACCATAACTATTGTTTGTGAGGAGTTTACAAAAAATGGATCACTGTCGTCGTTGCCAATTTCATGTATTGAAGCTGGAAATGATCATTCTTTACCAAATCTAGCCCTCAGGTTGAGAGGTGAAGAGCACTCCTTTATTGTTAAACCATCAACTTCTACGTGGAAGGGTCTCAAGATTCAGGATGATAGAAGTTCTCAATTGTCAAAGTTGCAGTTTGGAAATAAAACATCAAAAATAAGTCTCAACAGATGGAAGGCTGCTTTAACTTATGATCAGTATTCAATTATGGTGTCATGTCGATGCAATTATACATTATCAAGGTTGTTTTTTAAGCAACCAACCAGTTGGCGACCACGTACCTCAAGGGATATAAAGATATCTGTTTATTCCGAGATGTCAAGACAGTCTCCTGCAGCTCAAGAAAAAACCTACAGACTTCCTGTACAGATCTTAACTCTTCAAGCTTCAAATTTGACCTCTGAAGATCTAACTTTGACAATGCTTGCTCCAGCCTCATTTTCTTCACCCCTTTCAGTAGTCTCCCTGAATTCACCAACGACTCCAATCAGTCCTTTTATTGGTTTCTCAGAGATTTTAGGAAGAGAAAATGGTGAAAGAGGAATCAGTGCCACCCAGGGACAAAGACGAAGTTTCACTTCTCTTGTAAAAGATAATGAGAAACAAAGTTATGATGGCAAAGCTCAGGCAGCTACCATGAGTGATGATGTCATTCCTAGTTCTGGTCTTAGTTGTACACATCTATGGCTGCAGAGTAGAATTCCACTAGGATGTATTCCATCTCAATCCATTGCCACTATCAAGCTTGAACTACTTCCATTGACTGATGGCATAATTGTGCTGGACACTTTGCAAATTGACGTCAAGGAAAAAGGTGTTACCTATATCCCTGAATGCTCATTAAAGATATATGCAACTTCCAGTATTTCCAAGGGGACTATTTAG 2463 0.404 MNFLMRSTTGVYGERSAIPLPEPRADAHHNRSASAGSSLETLVSDDPYARHDAEVDRGMINKHVDVAEDEGWITIPCKVLPENWNCAPDIQSLHSLDRSFLLPGEQVHILACLSACKQDTSSFKVAAATSENDTGHSPKKENGTIENRNNAVSGEGELGTSVEEQLEDVSDGESLVQKEILKKQTALLLQKFENSHFFVRISESNDPLWSKRSSSEVVSNSSDANNGKASTIKSEETSLSSISAVIDRGSFDSNVSGGVARNSVKCCALPNGDIVVLLQVNVGVNFLSDPCIEILQFEKHQERRSSSFSKVDPVYTNQDSCVELLNWIIPLDSGKPSNCPPSPSHLTSTSGYGSSSQRSNISGSSSSQLFSFSNFRSYSMSSIPQTMTTPAAPVKAASSKPDFDFEEWDQISSQKYLRKKRGVEGLLSFRGVSLEQDRFYVCCGLEGIYTPGRRWRRKLEIIQPIHIHSFAADSNSDDLLCVQIKNVAPTHAPDIVIFIDTITIVCEEFTKNGSLSSLPISCIEAGNDHSLPNLALRLRGEEHSFIVKPSTSTWKGLKIQDDRSSQLSKLQFGNKTSKISLNRWKAALTYDQYSIMVSCRCNYTLSRLFFKQPTSWRPRTSRDIKISVYSEMSRQSPAAQEKTYRLPVQILTLQASNLTSEDLTLTMLAPASFSSPLSVVSLNSPTTPISPFIGFSEILGRENGERGISATQGQRRSFTSLVKDNEKQSYDGKAQAATMSDDVIPSSGLSCTHLWLQSRIPLGCIPSQSIATIKLELLPLTDGIIVLDTLQIDVKEKGVTYIPECSLKIYATSSISKGTI 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00714 820 MobiDBLite consensus disorder prediction 128 158 - -
Cca06g00714 820 MobiDBLite consensus disorder prediction 338 365 - -
Cca06g00714 820 Coils Coil 820 820 - -
Cca06g00714 820 MobiDBLite consensus disorder prediction 15 45 - -
Cca06g00714 820 PANTHER EXPRESSED PROTEIN 1 819 - -
Cca06g00714 820 PANTHER EXPRESSED PROTEIN 1 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00714 Cca-Chr6 19322093 19347957 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00714 - - gmx:100812482 1244.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00714 06 19322093 19347957 Cca06g00714 06 19322093 19347957 ECH