Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00709 ATGGCTATGGCTATGCAAAGCGGAATCGGAATCTCCAAGATCCTCATCATAGCTGGAGCAGGTTACACCGGCACCGTCCTCATCAAAAACGGAAAATTGTCCGATTTGATCGGCGACCTTCAGTTGCTTGTGAAGGGATTGGAAAAATCTGGGGATCAGGCTGAAGGTGAAAGTGAATATGCTGATGCCATAGCTGCTCAGGTGCGCCGTTTAGCAAATGAAGTTCGGCAGTTATCATCAAGCAGGCCAATCACAGTACTGAATGGGGGTTCTGGACAAAGTAATTTTTCATCCCTTGTCGTTCCAGCTGCTGCTGTGGGTGCTTTGGGTTATGGTTACATGTGGTGGAAGGGTATTTCATTCTCAGATCTTATGTATGTGACTAAACGGAATATGGAAAAAGCTGTTGCAGATTTAACAAAAAAGTTGCAGCATGCCTCAGATGTCATTGCTGATGCCAAGAAGCATTTGACCCAGAGAATTCAGAATTTAGATGACAAAATGCTCAAGCAGAATGAGTTGGCACGGTCAATTAAGGATGAGGTTTCTGGGGTTCGAAGTACTATCACTAATTTTCATGATGACTTGGGTCTCTTGCAACAAACGGTGGAAACATTGGATGAAAGGCTGGCTACCTTGAGTTATAAGCAGGATTATGCAAATCATGGATTGGCATATCTCATCGACTTTGTACATGGAAAAGCACGGAAAATGCCTGAAAGTTTGCAGCTGGAGAAACAGAAACTTCCAGGGAAGTCCCCCAATTTGCTCACATATAAAGGAACTCCAAATCTGAAGGGTCTTAAAGACATTGCAGAAACTTTGTCTATTGGTTTAGACAGGTCAGCTTCAGATACGATCATGCCAGATGGTATGGATAAACTAGAGCTGCAACGAAGGCCATTGTTGAGGACTACTTCAACCAGGTGTTGA 933 0.4373 MAMAMQSGIGISKILIIAGAGYTGTVLIKNGKLSDLIGDLQLLVKGLEKSGDQAEGESEYADAIAAQVRRLANEVRQLSSSRPITVLNGGSGQSNFSSLVVPAAAVGALGYGYMWWKGISFSDLMYVTKRNMEKAVADLTKKLQHASDVIADAKKHLTQRIQNLDDKMLKQNELARSIKDEVSGVRSTITNFHDDLGLLQQTVETLDERLATLSYKQDYANHGLAYLIDFVHGKARKMPESLQLEKQKLPGKSPNLLTYKGTPNLKGLKDIAETLSIGLDRSASDTIMPDGMDKLELQRRPLLRTTSTRC 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00709 310 PANTHER OS05G0182700 PROTEIN 3 306 - -
Cca06g00709 310 Coils Coil 154 181 - -
Cca06g00709 310 Pfam Protein of unknown function (DUF1664) 95 217 IPR012458 -
Cca06g00709 310 PANTHER OS05G0182700 PROTEIN 3 306 - -
Cca06g00709 310 Coils Coil 129 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00709 Cca-Chr6 19240893 19246241 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00709 - - gmx:778138 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00709 06 19240893 19246241 Cca06g00709 06 19240893 19246241 ECH