Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00700 ATGAAGGTTTTCTTGGTTTCTTTGTATTACTTGTTTCCTGCAATCATTCTTGTGCTGCTTACTCCAATTCCCAGTGCACAGTTAACGACAAGTGAGAACAGAATCCTTCTCCAAGTTCAGAAGCTTCTTGAATATCCTCAAGCTCTTCAAGGATGGAACAACATGACCAACTTCTGCTCCCTCCCTCCCTCACCTTCTCTCAAGATTGTGTGCTCTAATGGCCATGTAACCGAGTTAACCATCATTGGGAACAAGACTTCTCATTCTCCTCACAAAACTCAGCTTGTGTCTTGGAATTCATCTGAGACTCTCTCAGAAAGATTCTCCATTGAGTCTTTCTTTACTGTCTTGACAAAGCTTTCAAATCTGAAGGTGTTGTCATTGGTGTCACTTGGGTTGTGGGGTCCTTTGCCATCCAAGATTGACAGTTTCTGGTCCCTTCAAGTGCTCAATATTAGCTCAAACTTCATCTATGGGGAAATCTCATCATCAATTTCCTCTTTGAGAAGCATCAGGAGTCTTGTTTTGGCTGAAAATCTTTTCAATGGGAGTGTGCCTGATCTTGGGAGACTGGCTTCTCTTGAAGAGATCAACTTAGGTGGCAACAAATTGGGTCCTGGATTCCCTTCACTGAGCAAGAATATTGTGAGGTACCTAAACTTGGCTGCAAACCAATTAAGTGGCTCCCTTTCTGTGAATGTATCATGTAGTTCTTCTTTGGCATTTGTTGATATCTCACACAACCTCTTGGTGGGAAAATTGCCATCATGTATTAGTTCAAAGGGTTCAAATCGAACAACACTTTATGCCGGGAATTGTTTGACAACTAGAAGGTTAAATGGTCAACATCCATCCTCATATTGCAAGAAAGTGGAGGCTTTAGCTGTTAAACCACCACATAGAAGCCAGCAGAAGGAGTCAGAGATGCAACTAGGCCTAATACTTGGTATTGTTGGAGGTATTGTGGGAACTGCAGGGTTTCTGGTTCTTTTCATTTTGTGCATCTTCAAGAAGTCCAAAGCAGAAAAAGCAGACAGCAATTATAACCAAGACATCTCTGCTGATGATAAATTTTCTGTCCCTGCATATCCAACATCAAATATTAATGCAAAACATGTTCCTCTGTCAACGAGACAACCTATTCTGGGATTCCCACCATACTCCATTTTCTCATTAGAAGAAATTGAAGACGCTACAAACAACTTTGATCCATCAAATCTTATAGCAGAAGGATCACAGGGACAGCTATATAAAGGTTGGCTCATAGATGGTTCAATGGTCGTGGTCAATTGTGTAAAACTAAAGCAGAAGAGTTTGTACAAAAACTGTGCTCCCACCGCACACAACGGAGATGGAGGAGCATCGCGTCGCCGCAGCGGAACGATCCTTCCAGACGTGCTACTCCGGCGAGGCGCGCCACGCCCTCGACCTCCTCCCTGA 1440 0.4306 MKVFLVSLYYLFPAIILVLLTPIPSAQLTTSENRILLQVQKLLEYPQALQGWNNMTNFCSLPPSPSLKIVCSNGHVTELTIIGNKTSHSPHKTQLVSWNSSETLSERFSIESFFTVLTKLSNLKVLSLVSLGLWGPLPSKIDSFWSLQVLNISSNFIYGEISSSISSLRSIRSLVLAENLFNGSVPDLGRLASLEEINLGGNKLGPGFPSLSKNIVRYLNLAANQLSGSLSVNVSCSSSLAFVDISHNLLVGKLPSCISSKGSNRTTLYAGNCLTTRRLNGQHPSSYCKKVEALAVKPPHRSQQKESEMQLGLILGIVGGIVGTAGFLVLFILCIFKKSKAEKADSNYNQDISADDKFSVPAYPTSNINAKHVPLSTRQPILGFPPYSIFSLEEIEDATNNFDPSNLIAEGSQGQLYKGWLIDGSMVVVNCVKLKQKSLYKNCAPTAHNGDGGASRRRSGTILPDVLLRRGAPRPRPPP 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00700 479 Gene3D Phosphorylase Kinase; domain 1 377 444 - -
Cca06g00700 479 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 3 214 - -
Cca06g00700 479 SUPERFAMILY L domain-like 72 281 - -
Cca06g00700 479 PANTHER OS07G0166700 PROTEIN 212 442 IPR045272 GO:0004714|GO:0006468
Cca06g00700 479 PANTHER OS07G0166700 PROTEIN 3 214 IPR045272 GO:0004714|GO:0006468
Cca06g00700 479 Gene3D Ribonuclease Inhibitor 29 297 IPR032675 -
Cca06g00700 479 SUPERFAMILY Protein kinase-like (PK-like) 379 437 IPR011009 -
Cca06g00700 479 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 212 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00700 Cca-Chr6 19188380 19190749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00700 26 444 Miscellaneous Gene Families AT2G02780 40.619 5.73e-83 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00700 - - ccaj:109800333 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00700 06 19188380 19190749 Cca06g00700 06 19188380 19190749 ECH