Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00683 ATGGGTGCTTCTGGCAACAATTTTCTCCAAGTGGTCGCTAAGAACTTCGATGTTCTTGCTCTGCCCTTGGTCACCCTCGTTTACCCTTTATATGCTTCAATCAAGGCCATAGAGAGCAGGTCTACTACTGATGATCAACAATGGCTCACTTATTGGGTTCTCTATTCTATGATCACACTCTTCGAGCTCACATTTGCTAAAGTTCTTGAAGTGCTTGCCATATGGCCTTATGCTAAGTTGATCCTAAGCTGCTGGCTGGTTCTTCCAAACTTTAATGGGGCAGCACATGTTTATAGGCACTACGTTAGACCATTCTATATGAATCCACAAATGCCGCAAATCCCATTGCCGGGAGCTTCTCAAATGTGGTATGTTCCACGGAAGAACATATTTAGTAAGCAGGATGATGTCCTTACTGCTGCTGAGAGATACATGGAAGAGCATGGAACAGAAGCATTTGAAAGACTCATAACCAAGGCCGACAGAGAAGCTAGAGGAAGGAGGAATGGAAATCATATGATCTTTGATGATGATTATATATATTAA 546 0.4249 MGASGNNFLQVVAKNFDVLALPLVTLVYPLYASIKAIESRSTTDDQQWLTYWVLYSMITLFELTFAKVLEVLAIWPYAKLILSCWLVLPNFNGAAHVYRHYVRPFYMNPQMPQIPLPGASQMWYVPRKNIFSKQDDVLTAAERYMEEHGTEAFERLITKADREARGRRNGNHMIFDDDYIY 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00683 181 Pfam TB2/DP1, HVA22 family 29 105 IPR004345 -
Cca06g00683 181 PANTHER HVA22-LIKE PROTEINS 2 180 IPR004345 -
Cca06g00683 181 PANTHER HVA22-LIKE PROTEIN 2 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00683 Cca-Chr6 18795957 18798807 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00683 K17279 - gmx:100306464 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00683 06 18795957 18798807 Cca06g00683 06 18795957 18798807 ECH