Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00677 ATGGTTTTTCACAAATTCGGTGAGAAGCTATACTCGGGGCTGACTGCTCATCTCAAAGAGATAGCTAGGTCTATTGAAGCCACTCTAGAAGGCTCTTTTCTGGAAGAAATGAACAGGAAATGGAGTGATCATAATAAGGCATCAGATATGATTAGAGACATTATGATGTACATGGATAGGACTTACATCCCGGATGCTGGTCCTTCTGTTTATGAGCAAGAATTTGAGACTCATTTTCTTCAAGTTTCAGCTGAGTTCTACCGAGCAGAATCCCAAAAGTTTATTGAGTGTTGTGCTTGTGGGGATTATCTAAAGAATTCTGAGAAGCGTCTGAATAAGGAAATGGATAGAGTGAACCATTACTTGGATCCCGGGACAGGAAAGAAAATAACTAATGTGGTAAAGAAGGAGATGATTGAAAATTACATGCTTATATTAATACATAAGGAGAATTCTGGGTTGGTAAGCATGCTTTGTTATGATAAATATGATGATTTGGGTAGAATGTATAACCTGTTCCGTCGTGTTACTGACAGTCTCTCAAAAATACTTGAAGTGATGACTTCACATAACAGAGAGTCTGGTAAACAGCTTGTCACGGATCCTGAAAGGTTGAAGGATCCTGTTGAATTTGTGCAGAGGCTCTTAGACGAGAAAGAGAAGTATGACAAGATTATAAATTTGGCATTTAATAAAGATGGGTTCTTCCAGAATGCTTTGAATTCCTCATTTGAATATTTCATTAACTTGAATCCCCGTTTTCAAGAGTTCATTTCACTATTCGTAGATGATAAGGTGCGGCAAGGCCTCAATGGAGTTACTCTTGACAAGGTGATGATGTTATTCCGGTAG 852 0.3838 MVFHKFGEKLYSGLTAHLKEIARSIEATLEGSFLEEMNRKWSDHNKASDMIRDIMMYMDRTYIPDAGPSVYEQEFETHFLQVSAEFYRAESQKFIECCACGDYLKNSEKRLNKEMDRVNHYLDPGTGKKITNVVKKEMIENYMLILIHKENSGLVSMLCYDKYDDLGRMYNLFRRVTDSLSKILEVMTSHNRESGKQLVTDPERLKDPVEFVQRLLDEKEKYDKIINLAFNKDGFFQNALNSSFEYFINLNPRFQEFISLFVDDKVRQGLNGVTLDKVMMLFR 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00677 283 Gene3D Cullin Repeats 21 143 - -
Cca06g00677 283 PANTHER CULLIN 1 65 IPR045093 -
Cca06g00677 283 PANTHER CULLIN 65 283 IPR045093 -
Cca06g00677 283 PANTHER CULLIN-3A-RELATED 1 65 - -
Cca06g00677 283 PANTHER CULLIN-3A-RELATED 65 283 - -
Cca06g00677 283 Pfam Cullin family 69 283 IPR001373 GO:0006511|GO:0031625
Cca06g00677 283 Gene3D Cullin Repeats 144 251 - -
Cca06g00677 283 SUPERFAMILY Cullin repeat-like 1 251 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00677 Cca-Chr6 18635256 18636285 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00677 K03869 - pvy:116133430 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00677 06 18635256 18636285 Cca06g00677 06 18635256 18636285 ECH