Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00670 ATGGATTTCGGGGTTTCTGATGAGATGTTAGGCACTTTTGTGCCAATAGTAGTTTACTGGGTTTATTCTGGGATTTACGTTGTTCTGGGGTTGTTTGCTGAGAGTTATCGGTTACACTCGCAGCAAGAAGAAGATGAAAAAAATTTGGTGTCAAAGGGTGCTGTCGTTAAAGGTGTTCTCCTCCAACAGCTAGTTCAGGCTGTGGTTGCAACCCTCTTGTTTGCGCTGACAGGAAGTGATAGCCAAAATACTACCAGCCAGAATACTTCTCTACTTGTTTTAGCAAGACAGTTTGTTACTGCTATGCTTGTAATGGACGCATGGCAATACTTTATGCACAGATACATGCATCACAACAAGTTCCTATACAAACATATCCACTCTCTACATCACAGACTCATTGTACCCTATTCCTTTGGAGCTCTGTACAATCACCCTGTGGAGGGGCTTCTGAATGACACCGTTGGTGGGGCTCTATCTTTCCTACTCTCCGGGATGAGTCCTCGAGCCTCGATCTTCTTCTTCTCCTTCGCCACAATTAAAACAGTGGATGATCACTGTGGCTTATTGCTCCCTGGCAACCTTTTCCACATATTTTTCAAAAATAACTCAGCCTACCACGACGTACACCATCAGCTCTATGGCAACAAGTACAACTTCTCACAACCATTCTTCATCATGTGGGACAAAATCTTGGGTACTTACATGCCTTATACGTTGGAGGAGAGGGCAGGTGGTGGTTTTGAAACTAAACCTTGCAAAGTTTACAAGGATGATTGA 780 0.4372 MDFGVSDEMLGTFVPIVVYWVYSGIYVVLGLFAESYRLHSQQEEDEKNLVSKGAVVKGVLLQQLVQAVVATLLFALTGSDSQNTTSQNTSLLVLARQFVTAMLVMDAWQYFMHRYMHHNKFLYKHIHSLHHRLIVPYSFGALYNHPVEGLLNDTVGGALSFLLSGMSPRASIFFFSFATIKTVDDHCGLLLPGNLFHIFFKNNSAYHDVHHQLYGNKYNFSQPFFIMWDKILGTYMPYTLEERAGGGFETKPCKVYKDD 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00670 259 PANTHER BNACNNG58690D PROTEIN 1 257 - -
Cca06g00670 259 Pfam Fatty acid hydroxylase 98 234 IPR006694 GO:0005506|GO:0008610|GO:0016491
Cca06g00670 259 PANTHER STEROL DESATURASE 1 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00670 Cca-Chr6 18578954 18583009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00670 1 259 Acyl Lipid Metabolism Gene Families AT1G69640 77.992 3.51e-144 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00670 K04713 - gmx:100778076 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00670 06 18578954 18583009 Cca06g00670 06 18578954 18583009 ECH