Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00669 ATGGAAAGTCCTCCAAGTGCTCCAAACAATGATGCAAAGAAGCACCAGCAACTACACCAGAAAGATGAACAAACAACTTTGGTAGCTAGGAAGTACAAGGTTCAGTATGGAACTCCAAGTGTAAGGTCTGAATCAAGTTTGAACAGCCAAAGTGCACTGTTGCAAAGTGCTGTGAAGAATTCCTCAAGGAACATGAAAAACAAATTGCAGAAAAAGAGTTTCCTGGCTAGTCTTGGTTGCAAATGCTATTGTTCTGACAAAAATTCTGTTGATATTAGTGACCATGCAGGTGAAATCAGTTTTAACAAAAGTGCTCCTCATGGAAAAACAACTTCAAGAAATATTTTCAATGCTGATCCGGATGCTAATCATTCAGTCAAAATGGCTAAGCCTCATGCAGAACTCTTGATCAACAAAGATGTCTACTTCCAAAGGCCAGAGAAGTTAGGAGTTGGATTAAGCAGAGAAAACAGTTTAACACTCTCAGCTGTGAATTCTAACTCAGGAAATCAACTGCTCAAAATGCAACTTCAACAAGTAGAGAAGCCAAGGAAGTCATTGGAAGTGTTTGGCTCTCCAATATTGGAGAGCAGGAGCAAGTCCATGAGCTTTGATAAAAGGTTGGCAAAGACCTCTTGGGATCCTGCTCCTAAAATTGAAGAACCTGATTTCTCAGCAACTTCTGGTGGAAACTACAATGATGCTGAGAGTGATGCTAGTTCAGACTTGTTTGAGATTGAAAGCCTCACAGGCAAATCTAACTCCTTCCTTGGTAGATCAACATCCAATGTAATCTCTAGCTGTGCCAGCCCCACAACTTGTTATGCACCAAGTGAGGCAAGCATAGAATGGAGTGTGGTCACTGCCAGTGCCTTAGAGTACTCAGCCATGTCAGATTATGATGATCAAAGGTCAATAGCAACCACAAGGAGTCCAATTAGGACATCCTTAGTTTCCTCAAATGCTAAACCAAAGGCTATCAAAGAGATGCAGAGGCGGCGTCCAAGCATGCTGTTGGGTTGCAAGAGCCATAAAGCTGTAGGAGTTGCTATGGATGCCTTCACAGCATATGAGAAACCAAGTTCTAACACGCATACTCGTCGCAGATCAGATACCTTCCCTCAGGTGAGAGAGTTTAAGTCAGAGACAAAGGAGGATAGTTTTGGTGCAAGACATAAGCACCATGCTTATGCCACAGCCCCACTTCAGCGCTCACTCTCACCACATCCTTCACAACTGTTGTACATTTAG 1251 0.4269 MESPPSAPNNDAKKHQQLHQKDEQTTLVARKYKVQYGTPSVRSESSLNSQSALLQSAVKNSSRNMKNKLQKKSFLASLGCKCYCSDKNSVDISDHAGEISFNKSAPHGKTTSRNIFNADPDANHSVKMAKPHAELLINKDVYFQRPEKLGVGLSRENSLTLSAVNSNSGNQLLKMQLQQVEKPRKSLEVFGSPILESRSKSMSFDKRLAKTSWDPAPKIEEPDFSATSGGNYNDAESDASSDLFEIESLTGKSNSFLGRSTSNVISSCASPTTCYAPSEASIEWSVVTASALEYSAMSDYDDQRSIATTRSPIRTSLVSSNAKPKAIKEMQRRRPSMLLGCKSHKAVGVAMDAFTAYEKPSSNTHTRRRSDTFPQVREFKSETKEDSFGARHKHHAYATAPLQRSLSPHPSQLLYI 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00669 416 PANTHER PROTEIN PHYTOCHROME KINASE SUBSTRATE 1-RELATED 12 389 IPR039615 GO:0009638
Cca06g00669 416 PANTHER PROTEIN PHYTOCHROME KINASE SUBSTRATE 1 12 389 - -
Cca06g00669 416 MobiDBLite consensus disorder prediction 215 237 - -
Cca06g00669 416 MobiDBLite consensus disorder prediction 1 31 - -
Cca06g00669 416 MobiDBLite consensus disorder prediction 14 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00669 Cca-Chr6 18566257 18568720 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00669 - - gmx:100811572 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00669 06 18566257 18568720 Cca06g00669 06 18566257 18568720 ECH