Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00668 ATGGCAAAACCGAGTTCAGCTGATGGTAGGACTAGAAGCTCTGTGCAGATCTTTATAATAGTTGGTCTGTGCTGTTTCTTCTATATATTGGGTGCATGGCAGAGAAGTGGCTTTGGAAAGGGAGATAGCATCGCATTGGAGATTACTAAGAAAGAAACAAACTGTAATATAATTCCAAATTTGAGTTTTGACTCTCACCATGGTGGAGAAGTTAGCAAAATTGATGAATTTGAGTCAAAATCCAAGGTATTTGAAGCTTGCGATGCTCGATACACTGATTACACTCCCTGCCAAGATCAACGGCGTGCCATGACTTTTCCTAGAGACAATATGAATTATCGCGAGAGGCATTGCCCCCCTGAGGAAGAAAAGTTGCACTGTTTGATCCCAGCACCCAAGGGGTATGTAACGCCATTTCCATGGCCGAAGAGCCGTGATTATGTTCCATATGCAAATGCACCGTACAAGAGCCTTACAGTTGAGAAGGCTATTCAGAACTGGATCCAGTACGAGGGAAATGTGTTTAGATTCCCTGGTGGTGGAACCCAATTTCCACAAGGTGCAGACAAATATATTGATCAGCTTGCTTCTGTGATACCTATAAAGGATGGGACTGTTAGGACAGCACTGGACACTGGTTGTGGGGTTGCCAGTTGGGGTGCATATCTCTGGAGCAGAAATGTTATTGCCATGTCATTTGCGCCAAGGGACTCTCATGAAGCACAAGTACAGTTTGCTCTTGAAAGGGGTGTACCTGCTGTCATTGGTGTTCTGGGAACCATAAAATTGCCTTATCCTTCTGCAGCTTTTGACATGGCACATTGCTCTCGCTGCTTGATTCCTTGGGGAGCAAATGATGGGATGTATATGATGGAGGTTGACCGAGTACTAAGACCTGGTGGTTATTGGGTGCTTTCTGGTCCTCCAATCAATTGGAAGGTTAACTACAAAGCCTGGCAGAGACCTAGGGAGGATCTTGAAGAAGAACAAAGAAAGATTGAAGAGACTGCTAAACTCCTTTGCTGGGAGAAGAAGTCTGAGAAGTCTGAAATTGCCATTTGGCAAAAAACTTTGGACTCTGAATCATGTCGCAGCAGACAAGAAGATTCTAGTGTAAAATTCTGTGAATCAACAGATGCTAATGATGTCTGGTATAAGAAAATGGAGGTCTGCATTACTCCAAGTCCTAAAGTTTCTGGTGACCTTAAGCCATTTCCAGATAGGCTATATGCCATCCCTCCTAGAATTGCTGGTGGCTCTGTTCCTGGAGTTTCGGTTGAGTCATACCAAGAAGATAACAAAAAGTGGAAAAAGCATGTAAATGCTTATAAGAAAATTAACAGACTCCTGGATTCTGGAAGGTATCGCAACATTATGGATATGAATGCTGGATTGGGTAGTTTTGCTGCTGCTATTCAATCATCGAAGTTATGGGTTATGAATGTTGTGCCTACAATAGCTGAGAAAAGTACCCTGGGTGTCATTTATGAGCGAGGACTTATAGGCATCTATCATGATTGGTGCGAAGCCTTCTCCACTTACCCAAGGACATACGACCTTATTCATAGCCATGGTCTCTTTAGTCTGTACAAGGATACATGTAATATAGAAGACATTCTTCTGGAGATGGACCGGATTTTACGCCCAGAAGGTGCTGTAATATTCCGCGATGAAGTCGATATCTTAATTAAGGTAAAGAAATTGGTTGAAGGAATGAAATGGGATACTAAAATGGTTGATCATGAGGATGGTCCACTTGTTCCTGAGAAGATACTGATTGCTGTCAAGCAGTATTGGGTTACAAATGGAACCTCTACACAATAA 1824 0.4271 MAKPSSADGRTRSSVQIFIIVGLCCFFYILGAWQRSGFGKGDSIALEITKKETNCNIIPNLSFDSHHGGEVSKIDEFESKSKVFEACDARYTDYTPCQDQRRAMTFPRDNMNYRERHCPPEEEKLHCLIPAPKGYVTPFPWPKSRDYVPYANAPYKSLTVEKAIQNWIQYEGNVFRFPGGGTQFPQGADKYIDQLASVIPIKDGTVRTALDTGCGVASWGAYLWSRNVIAMSFAPRDSHEAQVQFALERGVPAVIGVLGTIKLPYPSAAFDMAHCSRCLIPWGANDGMYMMEVDRVLRPGGYWVLSGPPINWKVNYKAWQRPREDLEEEQRKIEETAKLLCWEKKSEKSEIAIWQKTLDSESCRSRQEDSSVKFCESTDANDVWYKKMEVCITPSPKVSGDLKPFPDRLYAIPPRIAGGSVPGVSVESYQEDNKKWKKHVNAYKKINRLLDSGRYRNIMDMNAGLGSFAAAIQSSKLWVMNVVPTIAEKSTLGVIYERGLIGIYHDWCEAFSTYPRTYDLIHSHGLFSLYKDTCNIEDILLEMDRILRPEGAVIFRDEVDILIKVKKLVEGMKWDTKMVDHEDGPLVPEKILIAVKQYWVTNGTSTQ 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00668 607 Gene3D Vaccinia Virus protein VP39 161 378 IPR029063 -
Cca06g00668 607 PANTHER METHYLTRANSFERASE PMT2-RELATED 5 603 - -
Cca06g00668 607 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 325 IPR029063 -
Cca06g00668 607 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 5 603 IPR004159 GO:0008168
Cca06g00668 607 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 93 596 IPR004159 GO:0008168
Cca06g00668 607 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 442 558 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00668 Cca-Chr6 18554297 18559319 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00668 - - gmx:100778611 1208.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00668 06 18554297 18559319 Cca06g00668 06 18554297 18559319 ECH