Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00655 ATGCGTACCAAAACCAAGAGCCTCTTTATGGCTAAGACCCACTTTGATTCCATCAACCTCAGAGTTGTAATTGATTTTGTATGTGTGAACATGTTGTGGGCCTTTGCTTCTCTGAGGGTGTTCGTTTGCAACTATGTGCTCTATGCTTTTCGATTGCTGCTCGGGTATATCTTAAGGTTTCTTCATTTGGGAGATGCAAAAGATGAGGTCATTGTTCAGAAACTACCACATGTTGAGAGGAACCAGGTTTCTGATTCTGAGGTTGATGGGTTCCGAGAGGAGCTGGTTAGTTTTCTGTTTTGGAGTGAAGATTTTCATGGAGAGACAGAGAGCTCTGTTTTTTTCATGGAGGTTGGTCCTGAAAGTGAGAAAAAAGATGGAGACACAGAGTGCTCTGTTTTGATGGATACCCACTGTGGTGTTCATGAAGATGGGGTGAAAACAGAGGTTCCCGCAGAAAGCTTTGTTTCAGAGGAGATTGATTCTGAGCCTCACATTCATGAAGATGGATTTGTTTTTGTGGAGAGTGACTCTGAAATCTCTTTTATTGATGAAGATAATAAGGAAATTGAAAGAGAAGGAGAGGAGTTTGTTTCTATGGAGACTGACTCGGATGTTTGTCAAGATGGTAAACAAATTGGTGAAGGTGAAACAGAGAGCTCTGTTTTAATAGAGAATGACTCTGATCTCCATCATGAAAGTATGAAGATAGAAGAGGAAATAGAAGAACGTGTTTCTTCGGAGATTGACTCTGTCATTCATGGAGAATTTAAGAAAATTGATGAAAATGAAACAGGGAGAGTAATTTTAATGGAGAATGTCTGTGGTGAAACTGTAAACGAGGATGTTGAGAAAATAGATGAAAATGAGGATTCTGTTTTTCAAGAAGAACAGTCTAATGTTCATGGTGATGGTACaaggaaagaagaaaaagtagtagaagaagaagaagaaTCATATGGGCTTGATTTTGTGGACACTAACTCTGTAACAACCACAAGCAAGTGTGAGTACTTATCAGGAAAAGATATCAGTGGGTTCATGGAAGAACCAACAACACTGAGGTTCAGTTTTCGAGAATTTTACATGGGTCCAGATGTTTCAACCGTTTCTGACAATGCATATGCCACCACTGAAATTATTGCCGACAAGGAATTTTCAGAGTTTGGTTCAGAGAGAGACCCTGTGGATCAAGCACAAGCCGAGGAATCTGTTCAAGAACAGGTTTCAGTTCCTTCTACCCATGTTCCATACTTTGAGAATGAGGTGTTTGGTGGATCCGATTCATCTGATGAAGATTATTTTCTTTACAATGAAAACTCACTCACATCTGATTCAGAGTCAGAGTCATCTAGCTCAAGTGGTCTAATCTGGGGCAACAGTAACAAAATTGATGATTCAATTGTATACCAGTTTCTGGATGGTAAAAAGGGTGGTGAAGGATTTGAACCTGAGATTCTGAAGCTGATAATGAGAGATGAAACAACAGAAGCTGCGGAGGAGAAGCAATCTTCATGTGATGGAAAGGTTTCAGAATTTAGTGTTGATGGAATTTATTCTGAAGATGGGTATGTGGAAATGGAACCTTGCATGAAGGGTTTGAAGTCCTTGAATGCACATGGTTTTGGTGGTAAAGACTCTGCCAAAGATGTGGTCAAAGATAAAAAAGAAGAGGTGTGCAAGAATGGGTTGGAGAAAAGTGAAGAAGCTAGGTGGGAAGATGAATTAAGTGAATCAGAATCTGATGAGGGTGACTTTGAATGGGAGCATGATGATTTAGTGGAACAGCTGAAATTGGAATTGAAAAATTCTAGGCAAGGAGGACTTGCCACAATTTTagaagaagaggaggaggaggaagtagacgaagacgaagaaaaggaaaaggtgaaggaaaaggaggcaagagTGTCTCCAAGAGTGGTTGAAGATCCTAAGCCAGTGGAAATTGAAGAGAAGCTTGAATACAAGGATCAAATTGATGAAATTGAAAAGGTTTACAAGAGCTATGAAGAGAAGATGAAGAAACTTGATATCTTGAATTACCAGACCATGCATGCATTAGGCCTTCTTCAGCTAAAAGACCCTCTCAAATTAATTTCAATACCAAAATCCACCATCCAAGGCGCAAAGCCTGTAATCTCTCAGAACTTGTGGCCACGCAAAGCAACAAAGAACTCATCTGACCCATTGATGAAGCTTGTTCATGAACTGCATAGAGATTTGGAATTAGTATATGTAGGCCAGGTTTGTCTCTCTTGGGAAATCCTATCTTGGCAACACAAGAAAGCCCTTGAGTTGCAACAATATGATTCACAAGGCTCTCATAGGTATAACCATGTTGCTGGTGAGTTTCAACTTTTTCAAGTCCTAGTTCAGAGATTCATAGAGAATGAGCCATTTCAAGGACCTAGGATGCAGAACTATGTCAAGAACCGTTGCGTGATTCGCAACTTGCTCCAAGTTCCAGGCATAAAAGATGATAGTAAAGGAGATGAGGATGAGAATCCTATTGCAAGTGGAAGGTTAGCCGATATCATCAAGGAATCAATGCGGATGTTCTGGGAATTTGTTCGAGCAGATAAAGATTATGGGAATGTGATCTTTAAAGCATCACAGCACAACAGAACTGTTCTTAAAGACCCTATGATTTCTGGTCTTATGGTGGACATTAAGACACAATTACAGAAAAAGGAGAAGAAGCTCAAGGACATTGTGAGAACCGGGAATTGCATAGTGAAGAAGTTCCAAAAGCACCATGAAGATCAACTTGATCATGAGCAATTGGTTGCTCAGGTGGGGTTGAGATTGATTTCAAGGGTGATAAACATGGCCAAATTCAGAAAAGAGCAGCTAATATGGTGCAATGAAAAGTTACACCGAGTCAAATTTTTGAGCAGGAAGATTGTCCAGGTGGAACCTTCCTTCTTGCTTTTTCCATGTTGA 2946 0.3859 MRTKTKSLFMAKTHFDSINLRVVIDFVCVNMLWAFASLRVFVCNYVLYAFRLLLGYILRFLHLGDAKDEVIVQKLPHVERNQVSDSEVDGFREELVSFLFWSEDFHGETESSVFFMEVGPESEKKDGDTECSVLMDTHCGVHEDGVKTEVPAESFVSEEIDSEPHIHEDGFVFVESDSEISFIDEDNKEIEREGEEFVSMETDSDVCQDGKQIGEGETESSVLIENDSDLHHESMKIEEEIEERVSSEIDSVIHGEFKKIDENETGRVILMENVCGETVNEDVEKIDENEDSVFQEEQSNVHGDGTRKEEKVVEEEEESYGLDFVDTNSVTTTSKCEYLSGKDISGFMEEPTTLRFSFREFYMGPDVSTVSDNAYATTEIIADKEFSEFGSERDPVDQAQAEESVQEQVSVPSTHVPYFENEVFGGSDSSDEDYFLYNENSLTSDSESESSSSSGLIWGNSNKIDDSIVYQFLDGKKGGEGFEPEILKLIMRDETTEAAEEKQSSCDGKVSEFSVDGIYSEDGYVEMEPCMKGLKSLNAHGFGGKDSAKDVVKDKKEEVCKNGLEKSEEARWEDELSESESDEGDFEWEHDDLVEQLKLELKNSRQGGLATILEEEEEEEVDEDEEKEKVKEKEARVSPRVVEDPKPVEIEEKLEYKDQIDEIEKVYKSYEEKMKKLDILNYQTMHALGLLQLKDPLKLISIPKSTIQGAKPVISQNLWPRKATKNSSDPLMKLVHELHRDLELVYVGQVCLSWEILSWQHKKALELQQYDSQGSHRYNHVAGEFQLFQVLVQRFIENEPFQGPRMQNYVKNRCVIRNLLQVPGIKDDSKGDEDENPIASGRLADIIKESMRMFWEFVRADKDYGNVIFKASQHNRTVLKDPMISGLMVDIKTQLQKKEKKLKDIVRTGNCIVKKFQKHHEDQLDHEQLVAQVGLRLISRVINMAKFRKEQLIWCNEKLHRVKFLSRKIVQVEPSFLLFPC 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00655 981 Coils Coil 613 636 - -
Cca06g00655 981 MobiDBLite consensus disorder prediction 389 412 - -
Cca06g00655 981 MobiDBLite consensus disorder prediction 295 312 - -
Cca06g00655 981 MobiDBLite consensus disorder prediction 565 586 - -
Cca06g00655 981 PANTHER OS09G0413600 PROTEIN 287 981 - -
Cca06g00655 981 PANTHER OS09G0413600 PROTEIN 16 291 - -
Cca06g00655 981 Coils Coil 888 908 - -
Cca06g00655 981 MobiDBLite consensus disorder prediction 291 312 - -
Cca06g00655 981 Pfam Protein of unknown function (DUF1666) 740 980 IPR012870 -
Cca06g00655 981 PANTHER FINGER FYVE DOMAIN PROTEIN, PUTATIVE (DUF1666)-RELATED 16 291 - -
Cca06g00655 981 PANTHER FINGER FYVE DOMAIN PROTEIN, PUTATIVE (DUF1666)-RELATED 287 981 - -
Cca06g00655 981 Coils Coil 653 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00655 Cca-Chr6 18276424 18286265 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00655 - - gmx:100784525 1462.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00655 06 18276424 18286265 Cca06g00655 06 18276424 18286265 ECH