Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00644 ATGAAAAAGTTGTATGGAGGAGTTCTGGTTGCCTCACTGTTTATGTTGTTTATGCTTATGATCCTGCGATATGGGGTCATGAAAAATCCTATTGTTGAAGGTTATCTGACTATACCTGCTGCTGTTGTTAATGGTACTAATCCTCTTAAGTGGATAAATCCCACAGTTCCGCCTGCTATTCAAAATCCAGATGATCGTTCTCAAGTTATTTCTTCTGATATTTTAGTATCTAGCCTATTTGCTGGGAACAACTTTTCCAAAGAAGAGCAACAAGCTCTGCAGACATGGAAACAATTGAACCACTTAATTGATCATACTCAGGGTTTACCCAATGCGGCAGAAGCTATCAAGGAGGCTGCCAGTGCATGGAATAGCCTTATTTCCTCAATTGAAGAGCAAAAACAAGGTCATGCAAATGATAGTTCAAGAACTAAAGAGAAGCAGTGTCCCCATTTTCTTAATAAAATGAATTCCACTGAACTTGGTAATAGTAGTTACAAAATGCAAGTACCATGTGGCCTGACACAAGGTTCTTCCATCTCTATAATTGGAATTCCAAATGGTCTTCTAGGTAATTTTCGAATTGACTTGACTGGAGAACCACTTCCTGGGGAGCCTGATCCTCCAATTATTTTACACTATAATGTTCGCCTTCATGGGGATAAAATCACTGAAGATCCCGTAATTGTCCAAAACACCTGGACTATAGCTCATGATTGGGGTGAAGAGGATCGTTGTCCATCCCCTACTCCTGAAAAGGTTGAGAAAGTTGATGATTTGGAGCAGTGTAATAAGATTGTGGGAAAGAACATTAGCCACTCGGCCGGCATGCATTCCCACAGTTCAAGGCAATCTTCAACAGCTGAAGAACAATCAATAAATAGGAAATATTTTCCTTTTAAGCAAGGTTACCCATTTGTAGCAACTCTTAGAGTGGGATCTGAGGGAATCCAGATGACAGTTGATGGAAAGCACATAACTTCATTCGCTTTCCGTGAAACTTTGGAGCCATGGCTTGTCAGTGAAATAAAAATCTCAGGGGACCTCAAATTAATATCTATTCTTGCCAGTGGTCTGCCCACATCAGAGGATTCAGATCATATTATTGATCTAGAATCATTGAAATCAAGTCCTATATCTGAACAGAGCCCATTGGATCTCTTTATCGGTGTTTTCTCTACTGCCAACAATTTTAAGCGTCGGATGGCTGTTAGAAGAACCTGGATGCAGTATAATGCAGTTCGATCAAATAAAACAGCTGTGCGCTTCTTTGTTGGTTTGCATAAAAGCCCTATAGTTAATGAAGAGTTGTGGAGAGAAGCACAAACTTATGGAGACGTGCAGCTAATGCCATTTGTTGATTACTACAGCCTCATCACTTGGAAAACTTTAGCAATCTGCATTTTTGGGACACAAGTTTCAGCTAAGTTTGTCATGAAGACAGATGATGATGCATTTGTCCGGGTAGATGAAGTGCTACATTCTTTGCATAAGATCAATGTCGATCATGGGTTACTATTTGGACTCATCAACTCAGATTCCCGACCTCACCGTAGTACAGATAGCAAATGGTACATCAGCCCAGAGGAATGGAGCGAGGGAACTTATCCTCCTTGGGCACATGGTCCCGGCTATGTGGTCTCACAAGATATAGCAAGGACGTTGTCCAAGAAATTCAGAGAGAACCATTTGAAGATGTTTAAATTAGAAGACGTTGCAATGGGAATCTGGATCGCAGACATGAAGAAGGAAGGTCTAGAAGTTCGGTATTCAAATGAGCCGAGAGTGAATGTTGAGGGTTGTAAGGATGGTTATGTGGTTGCTCATTACCAAGGCCCCAGGGAGATGCTCTGTTTGTGGCAGAAACTTGAGGAAGGAAAAGGTGCAAAATGCTGTGGTGATAGGAAATGA 1911 0.4118 MKKLYGGVLVASLFMLFMLMILRYGVMKNPIVEGYLTIPAAVVNGTNPLKWINPTVPPAIQNPDDRSQVISSDILVSSLFAGNNFSKEEQQALQTWKQLNHLIDHTQGLPNAAEAIKEAASAWNSLISSIEEQKQGHANDSSRTKEKQCPHFLNKMNSTELGNSSYKMQVPCGLTQGSSISIIGIPNGLLGNFRIDLTGEPLPGEPDPPIILHYNVRLHGDKITEDPVIVQNTWTIAHDWGEEDRCPSPTPEKVEKVDDLEQCNKIVGKNISHSAGMHSHSSRQSSTAEEQSINRKYFPFKQGYPFVATLRVGSEGIQMTVDGKHITSFAFRETLEPWLVSEIKISGDLKLISILASGLPTSEDSDHIIDLESLKSSPISEQSPLDLFIGVFSTANNFKRRMAVRRTWMQYNAVRSNKTAVRFFVGLHKSPIVNEELWREAQTYGDVQLMPFVDYYSLITWKTLAICIFGTQVSAKFVMKTDDDAFVRVDEVLHSLHKINVDHGLLFGLINSDSRPHRSTDSKWYISPEEWSEGTYPPWAHGPGYVVSQDIARTLSKKFRENHLKMFKLEDVAMGIWIADMKKEGLEVRYSNEPRVNVEGCKDGYVVAHYQGPREMLCLWQKLEEGKGAKCCGDRK 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00644 636 PANTHER - 66 625 - -
Cca06g00644 636 SUPERFAMILY Concanavalin A-like lectins/glucanases 166 357 IPR013320 -
Cca06g00644 636 Pfam Galactosyltransferase 399 582 IPR002659 GO:0006486|GO:0016020|GO:0016758
Cca06g00644 636 Gene3D - 377 594 - -
Cca06g00644 636 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 166 357 IPR001079 GO:0030246
Cca06g00644 636 Gene3D - 157 355 - -
Cca06g00644 636 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 66 625 IPR002659 GO:0006486|GO:0016020|GO:0016758
Cca06g00644 636 SMART Gal_bind_lectin_2 170 356 IPR001079 GO:0030246
Cca06g00644 636 CDD GLECT 166 354 IPR001079 GO:0030246
Cca06g00644 636 Pfam Galactoside-binding lectin 166 355 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00644 Cca-Chr6 18140973 18144676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00644 1 632 Glycosyltransferase AT1G26810 63.240 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00644 K14413 - gmx:100782548 1174.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00644 06 18140973 18144676 Cca06g00644 06 18140973 18144676 ECH