Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00628 ATGGGATTAGGAAGGATTGGATTGTTTGATCTTGAAAAGCAATTTGCTTTCTATGGAGCTTACCATAGCAACCCAGTTAACATAGCAATCCATGTTTTGTTCGTTTGGCCAATTTTTTTCTCAGCCCTTCTTATTCTCTACTTCGTCCCTCCCTTCTTCAACCTTCCAAATTTGGAGTTTTCCCTTTGGGGGAGCCATGTGATCTTGGTTTGGAATGTTGGGTTTCTTGTTGCTTTGGTATACTCAGTTTTCTATGTCTGTTTCGACCTCAAAGCTGGTTCCTTGGCTGCTTTGCTTTGTGCACTTTGTTGGGTCGCTAGTAGCTTTGTTGCAAGCCAACTTGGGTTGTCTCTAGCTTGGAAGGTTGTTCTGGTAGTTCAGATAGTCTGTTGGGTAGGGCAGTTCATTGGTCATGGAGTATTTGAGAAACGTGCCCCTGCTCTTTTGGATAACCTCATTCAGGCCTTTGTAATGGCTCCTTTCTTTGTATTGCTAGAGGTACTCCAGACTTTATTTGGTTATGAGCCATATCCAGGATTTCACTCAATAGTGAAAGCAAAAGTAGAAGCTAACATCAATGAATGGAAAGAAAGTAAGCAGAAACTAGTATCTTAG 615 0.4163 MGLGRIGLFDLEKQFAFYGAYHSNPVNIAIHVLFVWPIFFSALLILYFVPPFFNLPNLEFSLWGSHVILVWNVGFLVALVYSVFYVCFDLKAGSLAALLCALCWVASSFVASQLGLSLAWKVVLVVQIVCWVGQFIGHGVFEKRAPALLDNLIQAFVMAPFFVLLEVLQTLFGYEPYPGFHSIVKAKVEANINEWKESKQKLVS 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00628 204 PANTHER YGL010W-LIKE PROTEIN 4 204 - -
Cca06g00628 204 Pfam 2-hydroxy-palmitic acid dioxygenase Mpo1-like 10 170 IPR009305 -
Cca06g00628 204 PANTHER DUF962 DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_8G05310) 4 204 IPR009305 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00628 Cca-Chr6 17866964 17872415 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00628 - - gmx:100306243 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00628 06 17866964 17872415 Cca06g00628 06 17866964 17872415 ECH