Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00626 ATGAGTGTGATTGGTGAGATAACACAGCGTTTCACTCTATTCCCCACTCTCGCTAGGGTTTCACTACTCCTTTCTCCCCATTTACCCCTCGATTTCTTGAATCCTCATCCGCGAGTCTCGATTTCCTTCTCTGCAACCGAATTGAACATAAACCTGGGTGCTAATTATTCTGGAAGTTCCGTTGGGGGACATGAAGTGGGTCAACATTCCGTGGCTTCTAGGCATTCAACAATATTAGGTGGTTCCCAGGAAGGTGAAGTTGGTGGGTATAGGGCTCATACCTCCACTGCTGCACAATATGGGGGGCAGTATAGTTCTGTTTATGGCTCAGCTGCTCTGAGCAGTGCACAGCAGATCCCTTCATTGGGTACCAAGGGTTCTGCTGCAACAGCTTTAGATGGTCGTGGAAGTTATGCTTTGGGTGTATCTGATTCACCTAAGTTTGCTTCTGGAGATTATGTCTCATCCTCAAGCCATGGATATGGTCACAAATCTGACCAATTGTATGGTGACAAGGGTTTGGAGTATTCTGCAATAGACAGGAGGCAATATGGTGATCGACAGAGTGGTTACATTGGTAGGGACTTAACGAGTGATCCAACCGGAAGATATGCTGCTGATCCTGTTGGATTTAGTCATCAACGTCAGCAATCAGAACTATATGACCGCATTGATCAGGCAGCTTTGCTACGACAAGAGCAATTGCTCAAAGCTCAGTCTCTGCAAGCTGCATCACTTGATGGGGGTGCTAGACAAGCTGATTATCTTGCAGCAAGGGCTGCTGCTAGTCGTCATCCTACACAAGATCTTGTGTCTTATGGAGGAAGGATGGATTCTGATCCTCGTGGTTCATCCTTGCTAAGTGCTACTTCGTATAGTGGACAACATGCGCCATCAATATTAGGAGCAGCTCCAAGGAGAAATGTGGATGATCTCTTGTATTCTCAGAGTGCTTCAAATCCTGGTTATGGAGTGAGCCTACCTCCTGGTAGGGACTATGCTAGTGGAAAAGGTATTCATGGGAGTGCCATGGAGTTGGACTACCCAGGAAATGTGTTGTCACATGCTGCACATACTGCACATACTGCACATACTGATCGCAAGGATGATCGAGCAAGCTATCTACGAGAATTTGAGCTAAGGGAAGAAGAGCGTCGCCGGGAGCGCTTGCGTGAGAGAGATAGGGACAGAGAAAAGGAGAAAGAACGAGAACGATTGCGTGAACGGGAACGAGAAAGGGAACGGGAAAGGGAACGCATTTTGGAGCGGCGTGAGAAGGAGAGGGAGCGAGAGCGCAAACGTGCACTTGAAACTAGGCATGAGCGAACTCCAGCGAGATCCTCAAAGGATCCCCGTGGTACTTCTAAAGGTCCTCGTGCGTCATCTTTGACAAAGGAGGGGAGATCTTCACGACGGGATTCCCCACATCATGGTGCTTTACATAGGCACCATTCACCTGTTAAAGAAAAACGGAGAGAATATGTCTGCAAGGTATACCCATCCCGCTTGATAGATATTGAGAGGGATTACCTCTTAATAGATAAGCGATACCCCCGACTCTTCGTCTCTCCTGAATTCTCCAAGGCTGTTGTGAACTGGCCAAAGGAAAACCTTAAACTGTCTATCAATACTCCTGTCAGTTTTGAGCATGATTTTGTTGAAGAAGAAATTGCCACTGAGCCTAGAGACTCATCCAACAAGCTTTTGGTGGGACAACCTCTGAATTCTGAACAAGGAAACACAGTTTGGAATGCCAAAATAATCTTGATGAATGGACTTAGTAGGTCTGCATTGGAGGAGCTGTCATCTGATAAAATTGTTGATGATCGCATTCCTCATATTTGCAATTTCCTTAGATTTGCGGTTCTTAAGAAGGACCATTCTTTCATGGCAGTTGGTGGTCCATGGCAACCTGTTGATGGCAGTGATCCATCTATCGACAATAATTCTTTAATCAAAACTGCCCTCAGATATGCAAATGATGTTATTCAACTTGACTTGCAGAATTGTCAAAACTGGAACCGTTTTCTCGAGATACATTATGATAGAATTGGCAAAGATGGTTTCTTTAGCCATAAGGAAATTACTGTTCTTTATGTCCCTGATTTGTCTGACTGCCTCCCTTCGTTGGATGAATGGCGTGACAAGTGGCTTGCCCACAAGAAAGTTGTAGCTGAAAGAGAACATCAACTTTCTTTGAAAAAAGAGAAATCAAGAGATAACAAGGAAGTATCTAAAGATAAATCAGATAAAAGGAAAGATTTAGCTCCATCAGGACAGTCAGATGTTaagaaaaaagacaaagatagcaataaggaagaaattgaaggaaagaCTGAAGTTAATAACAATAAAATTGCTGTCATTGAAGGTTCTGACATTGGTGAAGAAGTCAAGAGTGCGGAGAAAAAGCAGGGGGAAACTGCCATTGGTCAAACAACAGGTGTCGTGAAGTCTGTGAAAAAGAAGATTATAAAGAAAGTTGTGAAACAGAAAGTTTCCACCAAGGCAAATGCTACTGTCACCAAACAAACAGACAAATCAGGTGAAAAGGATGTCACTGAGAAAGTGACAACATCCACTGTTACTGATCAGGGTGGAAAATCTTCTGCGGATCCTACTGAGGTTCAGACTCCTGTAAAAAACGTAGTTGCTGATGATATGTCTATTGGGAAAACTGGTGGTGAAGAGGGGAAAGATAAGGAAGTAAATAATTGTGAAGATAAATCTCAAACAAAGCCAGATGCAACAGTAAATGCAGTTTCAAGTGATCCTGTTGTGAAAACGACAAAGAAGAAGAAAATTATTAAGCGGGTGCCTAAAAAGAAGGTGGTGGGTGAGGCTTCTAAACCTCTAGTTCCTGAACCAAAAAAGGATGAAGGGAATCAAGCACAAGATGGTACCCTGAGCTCTGGCAAGCAGACTGCAGATGCAGATGCAGATGCAAATACTATAATGACCGAGGTGAAGAAACCTGTGAAGGTAGTTGCAAAGAAAAAGTTAAAATCTCCTGCCTCTAAGAAGCAAGATGAAACTGTGGATCCGAATAAAACAGAAATGATGTCCAACAAAAAGGATGAAGGGAATGTTGGGGCAATTCAAGCACAAGAGGGCACCCAGAGCACTGGCAAGCAGACTGCAAATGCAGATACCATAACGATGACAGAGGTGAAGAAAACTGGGAAGGTTGTACCTAAAAAACAATCTAAGGCCCCCACTTCTGAAACAAAGTCTGACAAAGATGACAAGAAGGAAGAAAAAGTTACAGGTGAAAAAAGTGGGGCAAAGACAGATAAGCAGAAAGCCTCTGATAATAAATATGTTAACAATGTAAAAGGGAAAGTGAAAGATGGGGACAAGTCTAAAGATGAGAAAGTAACCAAGAGGAAGTCTGATGAACCTCCTCGACACCCTGGATTTATTCTTCAAACAAAATCAACTAAAGATTCTAAAATACGTTCTTTGTCACTGTCACTGGATTCATTGCTGGATTACACAGATAAAGATGTTGAAGAATCAACTCTTGAGCTTTCATTGTTTGCCGAATCATTTTATGAAATGCTGCAGTTTCAAATGGGTTGTAGAATTTTGACTTTTCTTCAGAAACTGCGCATGAGATTTGTGAACAAAAGAAATCAGAGAAAGAGGCAGCGGGAAGATGAAAATGAAAAGGAAGATGCAACCAAATCTCCTGTGAAGCGTCAAAAGGGAGATGATCAAAAGGGAGATGATCCTTCTGTGAAGAATGAGACCACAAATATGGACACATCAAATCCAACCCAAGTAGATGATGAGAAAACTGTTGTTGAGAATAACAACTCTAGTGATAAGGGGGATGATGTGAAGATGGAAGATGGAACAGATGAGGAAGAAGATCCAGAGGAGGACCCTGAAGAGTATGAGGAAATGGAAAATGGTTGTCCCCAGAATGATGCATCAAATGATAAAAATGGTGAGCAAGAGGCGAATGCAAATACTGAATCTGAAAATATTACTAGCAATGAGAAAGCAGCAGATGAAGCTTCTAAAGGGGAGATTAAGGTTAAAGATGAGGTGCATGAATCCAAGGCCGATGAACAGGTAAAAGAAGAAAAGGAAGGAAAAGAAGACAGTAAGAAAGAAACTCCTGCTGTTAAGGAGGTTGCCGTGGACAGAGAATTGTTGAAGGCTTTCCGGTTTTTTGATCGTAATCGTGTTGGGTACATCAGGGTTGAAGATATGAGATTGGTTATGCATAATCTGGGGATGTTCCTTTCCCACAGGGATGTCAAGGAACTAGTGCAAAGTGCATTGTTGGAGAGCAACACTGGGAGGGACGACCGAATTCTTTATAATAAGCTAGTGCGGATGAACGATATTTGA 4362 0.4239 MSVIGEITQRFTLFPTLARVSLLLSPHLPLDFLNPHPRVSISFSATELNINLGANYSGSSVGGHEVGQHSVASRHSTILGGSQEGEVGGYRAHTSTAAQYGGQYSSVYGSAALSSAQQIPSLGTKGSAATALDGRGSYALGVSDSPKFASGDYVSSSSHGYGHKSDQLYGDKGLEYSAIDRRQYGDRQSGYIGRDLTSDPTGRYAADPVGFSHQRQQSELYDRIDQAALLRQEQLLKAQSLQAASLDGGARQADYLAARAAASRHPTQDLVSYGGRMDSDPRGSSLLSATSYSGQHAPSILGAAPRRNVDDLLYSQSASNPGYGVSLPPGRDYASGKGIHGSAMELDYPGNVLSHAAHTAHTAHTDRKDDRASYLREFELREEERRRERLRERDRDREKEKERERLRERERERERERERILERREKERERERKRALETRHERTPARSSKDPRGTSKGPRASSLTKEGRSSRRDSPHHGALHRHHSPVKEKRREYVCKVYPSRLIDIERDYLLIDKRYPRLFVSPEFSKAVVNWPKENLKLSINTPVSFEHDFVEEEIATEPRDSSNKLLVGQPLNSEQGNTVWNAKIILMNGLSRSALEELSSDKIVDDRIPHICNFLRFAVLKKDHSFMAVGGPWQPVDGSDPSIDNNSLIKTALRYANDVIQLDLQNCQNWNRFLEIHYDRIGKDGFFSHKEITVLYVPDLSDCLPSLDEWRDKWLAHKKVVAEREHQLSLKKEKSRDNKEVSKDKSDKRKDLAPSGQSDVKKKDKDSNKEEIEGKTEVNNNKIAVIEGSDIGEEVKSAEKKQGETAIGQTTGVVKSVKKKIIKKVVKQKVSTKANATVTKQTDKSGEKDVTEKVTTSTVTDQGGKSSADPTEVQTPVKNVVADDMSIGKTGGEEGKDKEVNNCEDKSQTKPDATVNAVSSDPVVKTTKKKKIIKRVPKKKVVGEASKPLVPEPKKDEGNQAQDGTLSSGKQTADADADANTIMTEVKKPVKVVAKKKLKSPASKKQDETVDPNKTEMMSNKKDEGNVGAIQAQEGTQSTGKQTANADTITMTEVKKTGKVVPKKQSKAPTSETKSDKDDKKEEKVTGEKSGAKTDKQKASDNKYVNNVKGKVKDGDKSKDEKVTKRKSDEPPRHPGFILQTKSTKDSKIRSLSLSLDSLLDYTDKDVEESTLELSLFAESFYEMLQFQMGCRILTFLQKLRMRFVNKRNQRKRQREDENEKEDATKSPVKRQKGDDQKGDDPSVKNETTNMDTSNPTQVDDEKTVVENNNSSDKGDDVKMEDGTDEEEDPEEDPEEYEEMENGCPQNDASNDKNGEQEANANTESENITSNEKAADEASKGEIKVKDEVHESKADEQVKEEKEGKEDSKKETPAVKEVAVDRELLKAFRFFDRNRVGYIRVEDMRLVMHNLGMFLSHRDVKELVQSALLESNTGRDDRILYNKLVRMNDI 1453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00626 1453 MobiDBLite consensus disorder prediction 1213 1248 - -
Cca06g00626 1453 SUPERFAMILY EF-hand 1385 1430 IPR011992 -
Cca06g00626 1453 Coils Coil 1200 1220 - -
Cca06g00626 1453 PANTHER CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 53 869 IPR025224 GO:0006355
Cca06g00626 1453 MobiDBLite consensus disorder prediction 382 453 - -
Cca06g00626 1453 Gene3D - 1383 1451 - -
Cca06g00626 1453 PANTHER CCAR1 HOMOLOG 53 869 - -
Cca06g00626 1453 Coils Coil 380 441 - -
Cca06g00626 1453 MobiDBLite consensus disorder prediction 1072 1136 - -
Cca06g00626 1453 MobiDBLite consensus disorder prediction 1003 1024 - -
Cca06g00626 1453 MobiDBLite consensus disorder prediction 892 909 - -
Cca06g00626 1453 MobiDBLite consensus disorder prediction 1249 1268 - -
Cca06g00626 1453 MobiDBLite consensus disorder prediction 1283 1305 - -
Cca06g00626 1453 MobiDBLite consensus disorder prediction 1210 1375 - -
Cca06g00626 1453 MobiDBLite consensus disorder prediction 855 877 - -
Cca06g00626 1453 PANTHER CCAR1 HOMOLOG 997 1452 - -
Cca06g00626 1453 SMART DBC1_2 611 736 IPR025954 -
Cca06g00626 1453 Pfam DBC1 613 729 IPR025954 -
Cca06g00626 1453 MobiDBLite consensus disorder prediction 834 1149 - -
Cca06g00626 1453 MobiDBLite consensus disorder prediction 1333 1375 - -
Cca06g00626 1453 ProSiteProfiles EF-hand calcium-binding domain profile. 1382 1417 IPR002048 GO:0005509
Cca06g00626 1453 PANTHER CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 997 1452 IPR025224 GO:0006355
Cca06g00626 1453 MobiDBLite consensus disorder prediction 1307 1332 - -
Cca06g00626 1453 MobiDBLite consensus disorder prediction 1033 1055 - -
Cca06g00626 1453 Pfam BURAN domain 506 592 IPR045354 -
Cca06g00626 1453 MobiDBLite consensus disorder prediction 910 926 - -
Cca06g00626 1453 MobiDBLite consensus disorder prediction 382 490 - -
Cca06g00626 1453 Pfam LAIKA domain 1135 1200 IPR045353 -
Cca06g00626 1453 MobiDBLite consensus disorder prediction 963 981 - -
Cca06g00626 1453 MobiDBLite consensus disorder prediction 729 779 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00626 435 845 EF-hand Containing Proteins AT2G03150 48.916 9.10e-115 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00626 K25827 - gmx:100790366 1522.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00626 06 17839229 17854103 Cca06g00626 06 17839229 17854103 ECH