Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00602 ATGAGGAAGAATGGGTGGCAGCTACCTTACCATCCTCTCCAGGTGGTGGCCATTGCTGTGTTTTTGGCTCTGGGGTTTGCCTTCTACGTGTTCTTTGCTCCATTTGTTGGGAAGAAGATGTATCAATATGTTGTTATGGGCCTCTACACACCCCTGATTACTTGTGTCTTTGGACTGTACATTTGGTGTGCAGCATCTGATCCTGCAGATCCTGGGGTTTTCAAGTCCAAAAAATATCTTAAAATTCCAGATGGCAAAAAGCTTGATGGACTTAAGGATTCTAAACTAGGAGGGGAATCAACTTCATCAATGCATGATGGGAATGTTTCAACTGTTGGCCCAAAATCGGTCGATAAGGAAGATTTGGGGACTGAAGCTAGTTTTAAAGATGCTGCTATATCTACAGAGAAGAAAAGTGAATCATCACCTTCTTCGTCCTGTCTCCAATTGGTTTGCTCTCCTTGTGCTTATATCTGTGGCTGCTCAAGTTCAAGTAAGGAGTCTTTTGATGAACAAGCAAGTGAAGATGGCATGTTCTATTGCAGTTTGTGTGAAGTTGAGGTCTTCAAGTATAGCAAGCACTGTAGAGTTTGTGACAAGTGTGTTGATCGCTTTGATCATCATTGCAGATGGCTCAACAATTGTATTGGGAAAAGGAACTACAGGAAATTTTTCACCCTTATGGTTGCTGCTCTCATCTTGCTTATTCTTCAGTGGGTGACTGGGATACTTGTGCTTATCTGCTGTTTCATTGAGAAGAAGAAATTTTCCGCAGATATTGCCTCCCAGTTAGGGAGCAGCTTCTCTCTTGTTCCCTTTGTTATTGTAGTGGCAGTCTGCACCATTTTGGCTATGATGGCTACCTTACCCCTTGCTCAGCTGTTCTTCTTTCATATTCTTCTCATTAAAAAGGGAATCAGCACATATGATTACATCATAGCTTTGAGGGAGCAGGAGCAGGAGCAGCAAGGTATAGGAGGTCAGCAGAGTCCTCAAATGTCACCTGTTAGCTCACTTACTGGGATGAGCAGTGCAAGCTCCTTTACTACTTTCCATCGTGGCGCGTGGTGCACACCCCCACGTTTATTCCTTGAAGATCAGTTTGATGTAGTGCCCCCAGAAACTGCTTCTGTAAGCTCATCGCTGGGAAGGAAGACAATGAAAGACGAGCCAGTTAAGAAAAAGAATCCCGGAGCAGTGAAAATTAGTCCATGGACGCTTGCACGGTTGAATGCAGAAGAGGTTTCTAAGGCGGCCGCAGAAGCAAGAAAAAAGTCAAAGATTCTTCAGCCAGTGACAAGGCATAACAACGAGCCTTTCAGGCTGGAGCCAGACCGCAACTCTGGCAGCAGCAGCCGGCGAATGAGCCCCAGGATTGAGAACAACAGAAGACGGGCAGGCAAGCGCATTCGCCTACCTGCCGACTTGCCTATGGAAGCCATACCAAAATTTTCTGCCAGCAGCACTGACAAAGGCTTCAGTGGACCGTCTAGTTTGGTGCCTCTCCAGCTCAAAGCACGCAGCGCGTTTCAAACAAGTCAAGCAGTGTCAAGCTCAGCTGGGATTGTTGCTTCCTCTCCTGAGAGCAGTATAGACTCGCCTGACATCCACCCATTTCATGTGTCTACGACAGAAGCCGAAGAAGCAAGGAGGCTAGCCGGTATTTCGGCGGTCAGTGCAGCGAGCCTGAAGGGAATCCCTCTGTCAAGGTCAACAAGTGATGGGTATGAGGCCTCTGGTGGGGAGGATAGTGACAGGGTTCCCACAAGGATTGTTCAGAGATCAACAAATTGGACTAATCTGCTCTTCAGTGCTGATCAGGAAGAGAGAGCCTTTGAGCCAAAATCATCATCCAGCATGGTTCATATTGGGAAGTTGTGA 1881 0.4662 MRKNGWQLPYHPLQVVAIAVFLALGFAFYVFFAPFVGKKMYQYVVMGLYTPLITCVFGLYIWCAASDPADPGVFKSKKYLKIPDGKKLDGLKDSKLGGESTSSMHDGNVSTVGPKSVDKEDLGTEASFKDAAISTEKKSESSPSSSCLQLVCSPCAYICGCSSSSKESFDEQASEDGMFYCSLCEVEVFKYSKHCRVCDKCVDRFDHHCRWLNNCIGKRNYRKFFTLMVAALILLILQWVTGILVLICCFIEKKKFSADIASQLGSSFSLVPFVIVVAVCTILAMMATLPLAQLFFFHILLIKKGISTYDYIIALREQEQEQQGIGGQQSPQMSPVSSLTGMSSASSFTTFHRGAWCTPPRLFLEDQFDVVPPETASVSSSLGRKTMKDEPVKKKNPGAVKISPWTLARLNAEEVSKAAAEARKKSKILQPVTRHNNEPFRLEPDRNSGSSSRRMSPRIENNRRRAGKRIRLPADLPMEAIPKFSASSTDKGFSGPSSLVPLQLKARSAFQTSQAVSSSAGIVASSPESSIDSPDIHPFHVSTTEAEEARRLAGISAVSAASLKGIPLSRSTSDGYEASGGEDSDRVPTRIVQRSTNWTNLLFSADQEERAFEPKSSSSMVHIGKL 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00602 626 MobiDBLite consensus disorder prediction 425 465 - -
Cca06g00602 626 PANTHER S-ACYLTRANSFERASE 8 536 - -
Cca06g00602 626 MobiDBLite consensus disorder prediction 569 591 - -
Cca06g00602 626 Pfam DHHC palmitoyltransferase 179 312 IPR001594 GO:0016409
Cca06g00602 626 MobiDBLite consensus disorder prediction 96 110 - -
Cca06g00602 626 ProSiteProfiles DHHC domain profile. 179 229 - -
Cca06g00602 626 MobiDBLite consensus disorder prediction 91 119 - -
Cca06g00602 626 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 8 536 - -
Cca06g00602 626 MobiDBLite consensus disorder prediction 375 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00602 Cca-Chr6 17346531 17352481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00602 172 310 Lipid Metabolism Gene Families AT4G22750 27.143 3.73e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00602 K20027 - gmx:100803007 1090.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00602 06 17346531 17352481 Cca06g00602 06 17346531 17352481 ECH