Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00589 ATGACCATGAGTAACAGTCATAGAGGAGGAAGAGAGGACAAGCCAAATATACGATCAATATCAATGGATGAAGCGAAGACAGCAAGATTGACAAAATCTGCTTTAGGTTTTGGAGTAATGTTTTCAGTGTTCACCTTCTTCTTGATTCAGATCACTTTGATACAAGATGCAACTACGTGGAAGGTGAAATTGAGACATGTGCTATCAATTTCCCAATGGGCCCCAAATCGAGATACCAGTGTTGCAATCACATGCAACTATTCTCATCAGCTATACGATATTTGCACAATCAACGGTCCAACGCTCTTGGATCATGCTTCCTCAACTTTCTTCACTCTGGGTCCCCACACACAGGATAAATGCCCAATCCCTATGAAAATCCGTCCTTACCCTCGCAAGGGTGACAAGACGGCAATGTCCAATGTTAACGAAGTCACACTCACTGCAGCTCCACCCAAACTATCCTGCGCCGTCACACACCGTACCCCAGCCATTGTATTCAGTGCGGCCGGGTACACCGGAAACTTCTTTCACGAAATAGACGAGAACTTCATCCCACTCTTCATCACCATCAATTCCTTATTCCCTAACCAAGATGTAACACTTGTGGTCATGGACGGTAACATTTGGTGGTTCCAAAAGTACGCTGAATTGTTATCAGCATTCACTCCCCACCGTTTGATCATCGACACAAAGAATTTATCTACCGTCCATTGCTTCCCATCAGCCACTATAGGGTTGATAAAACATGGACCCGTTATCATAGACCCAACATTGCTACAACCACATCCTAAAACCCTACATGATTTTCGTGCATTACTAGACAAAACATATGCCAAAGTTGACACCACCCCAAATCATCAAAATGGGAAAAATTCAAAGCCACGTTTGACATTGATCGATAGAAGAGGCAGTGTGAGCCGTGTGATGTCCAACCAAGGAGAAGTGATCAAGGTGGCTGAAGAATTAGGGTTCAATGTGCATGTGTTGGACCCAACAAGAAACAATTCTATGGCCAATGTTTATAGGGTGGTTCATGATAGTCACGTGTTGTTAGGGGTGCATGGTGCGGGTTTGACAAATTTCTTGTTCCTCAGGCCGGGCTCAGTGTTGCTACAAGTGGTGCCCATTGGGCTTGAGTGGTCCTCAAGAACTTACTATGAGAACCCACCAAAATTGTTGGGATTGGAGTACATAGAGTACAAGATTGAGGCAAATGAAAGTAGTTTGTCAGAGAGATATGGTGCTAATAGCTTGGTAGTCAAGGACCCCAGTGCGTTTCATAAACATATATGGTCTAAACAACGGATATATTTGAAGGAGCAAAATGTGGGAATTGACCTAGTTAGGTTTAGAAAGTGTTTGACAAATGCATATGAGAAGGCCAAAATATTTATGAGCAGAGTCAACTAG 1413 0.4331 MTMSNSHRGGREDKPNIRSISMDEAKTARLTKSALGFGVMFSVFTFFLIQITLIQDATTWKVKLRHVLSISQWAPNRDTSVAITCNYSHQLYDICTINGPTLLDHASSTFFTLGPHTQDKCPIPMKIRPYPRKGDKTAMSNVNEVTLTAAPPKLSCAVTHRTPAIVFSAAGYTGNFFHEIDENFIPLFITINSLFPNQDVTLVVMDGNIWWFQKYAELLSAFTPHRLIIDTKNLSTVHCFPSATIGLIKHGPVIIDPTLLQPHPKTLHDFRALLDKTYAKVDTTPNHQNGKNSKPRLTLIDRRGSVSRVMSNQGEVIKVAEELGFNVHVLDPTRNNSMANVYRVVHDSHVLLGVHGAGLTNFLFLRPGSVLLQVVPIGLEWSSRTYYENPPKLLGLEYIEYKIEANESSLSERYGANSLVVKDPSAFHKHIWSKQRIYLKEQNVGIDLVRFRKCLTNAYEKAKIFMSRVN 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00589 470 Pfam Glycosyltransferase 61 265 371 IPR007657 GO:0016757
Cca06g00589 470 PANTHER GLYCOSYLTRANSFERASE 43 467 IPR007657 GO:0016757
Cca06g00589 470 MobiDBLite consensus disorder prediction 1 20 - -
Cca06g00589 470 PANTHER GLYCOSYLTRANSFERASE 43 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00589 Cca-Chr6 17178683 17182594 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00589 - - gmx:100800935 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00589 06 17178683 17182594 Cca06g00589 06 17178683 17182594 ECH