Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00504 ATGGCATTCCGCGCACTTGCTCACTccaccgccaccgccaccgcctcatgccgccgcTCTATCGTATTCACACTCTCTTCCTCCTTTTcctccgcctgccggaggcggacccgccctccgccgccgccgccgtctccgAAGAAGGTGCCATTCACGGTGTCGGTTCACGGGAAGACGTGGCAGGACCCGTATCGGTGGATGTCCAACACCGACGACCCGCACCTGTTGGAGCATCTCAACCGCGAAAACGACTACGCCGATGCTTTCATGGCTGACACACTCAAACTCCGTTCCGTGTTGTCTTCCGAGATGAAACCACGATTGCCTCCCACCGTTTCCACTCCCCCTGAGCGTTGGGGACCCTGGCTGTATTATCAGTATATTCCAGAGGGAATGGAATATCCTATTTTGTGTAGGAGGCTCGAAACGGAGAGAACTGGTTGGCTGAATAATTTCTTTCTCCACTGTGGAATGAGAAGATCAAAAAGGGAGGAAATTTTACTTGACTGGAATGAACTTGCAGAGAAATATGGGTATGTCAATGTTGGAACATGCAGAGTTTCCCCTGACCACAACTACCTTGCGTACACACTTGATATTTCTGGTGGAGAACGATTCATGCTCCAGGTAAAAGACCTAAGAAGTGGATTAATAGACCCTAAATCGGAAGTTGATGGTGCTGTTAGCTTGGCTTGGGCTCAAGATGCAAGTTCTCTGTTTTATACTCTATCAGATGAAAATCAGAGACCTTACAGGGTTCTCTGCAGAAAACTTGGATATAATCATGTGGATGATCTCCCAGTATTTACTGAAAATGATTCCAGTTTTTGTGTGGACATAACTAGCACAAAAGACGGAAAATTCATAACTGTTTATGTTATAGATTCAGTCAATCCATCAAATGGTTTACAAAAAATATGTAATCGTACTTCTGGTGTACAGTACTTTGTGGAACATCACTCTGGTTTATTTTATATTCTTACAAATGCTCCTATTCCTGATGCCCAATGGTCTGGTCAAGGTTATTATCTGGTCAGATGTCGAGTTGAAGATATAGAGTCAGCTAAATTGCAGAATATCATCCTTCCTGATATAGATATGAGCCTATGTGATATGGACATTTTTAATGGATATCTGGTTCTTTTCTTCACTAAGAAAGGTCTTCCTCTGCTATGCTCATTGAACTTTCCAATGCAAATTGATTTCAAGCATCAAGTATACATTCAAGACCTGAAACCATGGTACTTTCCTCTGCCATCAAATACATGCAGTGTCAGTCCTGGTTCAAATCACGACTTCTTCAATATGGTTTACCGTGTGGTGCTTTCATTGCCTGTGATGCCGGATTTAATTGTTGACTATAACATGTCAAGACATACATATTCAATTGTGCATCAAGAGGAAGTGAACTGTGAATCTGTTGGTCGGTCATGCATCCCAACTTTTGAGCTAAATTATGATAAGAGTAATATTCTAGAGGCATGTAGTGATAAGAAAGATGATAAGAAAGAGTGTGCTGCGAATTTTAATTCACAAAGATGGAAGGACTTTTCTCAAGTATACTGTTGTCAGAGGGAGGAAGTTATTTCCTATGACGGTATAATGGTTCCACTAACCATTGTGTACTCTAGAGAATCGTGGAAGAAGGGTCAATCTCCAGGACTCTTAGTAGGTTATGGAGCGTATGGAGAAGATCTGGATAAAAGCTGGTGTTCAGATCGCCTGAGTTTACTGGACCGTGGTTGGGTAGTGGCATTTGCTGATGTAAGGggtggtggtggtggtggtCCTTCATGGCATAAATCTGGGAGTGGATTAAACAAACACAATTCAATATTGGACTTTGTATACTGTGGCAATTACCTGGTTAATGAGGGTTATGTTCAGAGTGATATGCTTGGTGCTATTGGATGGAGCGCAGGCTGCCTTATTGTTGGTGCAGCTATGAATATGTACCCACAACAGTTTCGTGCTGCCATATTAAAAGTACCATTTCTTGATGTATGCAACACATTGTTGGATCCCAGTCTGCCTCTCACAATTTTGGATTATGAAGAATTTGGAAATCCTCAAATACAGTCAAATTTTGATTCTATTTTTAGTTATTCTCCGTATGACAACATTCCTCGAGGCAGTTGCTTTCCTTCCGTTTTGGTTACGGCAGCAGTTAATGATTCAAGGGTTGGAGTTTGGGAAGGTGCTAAGTGGGTTGCTAAAGTACGAGATAGTACCTGCCCTCATTGTTGTCATGCTATCATCATGAAAACAAGTATGATAGGAGGGCATTTTGGCGAAGGCGGTCGCTATGCTCAATGTGACGAAACAGCTTATGATGCAAGACTTTCATTTGGGTCAAGGAAAATTTTCTATTTTCCTACCTGGGCTCCAGAGATGCAGATAAATTTGAGCATCTATTATCTATTTGGATTTGCTGCACATTATACGGAAGAAAGGCAATGCCAAGTTGGAAAATTTTGGTTTGGAGATAGTAATAATAAGACTTGCAAGATATTCCTTTATTATGCATTCTGCAGAATCTTCCTCCCTGTGCCCGCTTTTGGTCTTGTGGAATGGAACTAA 2580 0.3957 MAFRALAHSTATATASCRRSIVFTLSSSFSSACRRRTRPPPPPPSPKKVPFTVSVHGKTWQDPYRWMSNTDDPHLLEHLNRENDYADAFMADTLKLRSVLSSEMKPRLPPTVSTPPERWGPWLYYQYIPEGMEYPILCRRLETERTGWLNNFFLHCGMRRSKREEILLDWNELAEKYGYVNVGTCRVSPDHNYLAYTLDISGGERFMLQVKDLRSGLIDPKSEVDGAVSLAWAQDASSLFYTLSDENQRPYRVLCRKLGYNHVDDLPVFTENDSSFCVDITSTKDGKFITVYVIDSVNPSNGLQKICNRTSGVQYFVEHHSGLFYILTNAPIPDAQWSGQGYYLVRCRVEDIESAKLQNIILPDIDMSLCDMDIFNGYLVLFFTKKGLPLLCSLNFPMQIDFKHQVYIQDLKPWYFPLPSNTCSVSPGSNHDFFNMVYRVVLSLPVMPDLIVDYNMSRHTYSIVHQEEVNCESVGRSCIPTFELNYDKSNILEACSDKKDDKKECAANFNSQRWKDFSQVYCCQREEVISYDGIMVPLTIVYSRESWKKGQSPGLLVGYGAYGEDLDKSWCSDRLSLLDRGWVVAFADVRGGGGGGPSWHKSGSGLNKHNSILDFVYCGNYLVNEGYVQSDMLGAIGWSAGCLIVGAAMNMYPQQFRAAILKVPFLDVCNTLLDPSLPLTILDYEEFGNPQIQSNFDSIFSYSPYDNIPRGSCFPSVLVTAAVNDSRVGVWEGAKWVAKVRDSTCPHCCHAIIMKTSMIGGHFGEGGRYAQCDETAYDARLSFGSRKIFYFPTWAPEMQINLSIYYLFGFAAHYTEERQCQVGKFWFGDSNNKTCKIFLYYAFCRIFLPVPAFGLVEWN 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00504 859 Pfam Prolyl oligopeptidase family 573 774 IPR001375 GO:0006508|GO:0008236
Cca06g00504 859 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 43 398 IPR023302 GO:0004252
Cca06g00504 859 Gene3D alpha/beta hydrolase 44 116 IPR029058 -
Cca06g00504 859 SUPERFAMILY Peptidase/esterase 'gauge' domain 39 469 - -
Cca06g00504 859 PANTHER PROTEASE FAMILY S9A OLIGOPEPTIDASE 28 779 - -
Cca06g00504 859 Gene3D alpha/beta hydrolase 487 788 IPR029058 -
Cca06g00504 859 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 637 657 IPR002470 GO:0004252|GO:0006508
Cca06g00504 859 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 607 626 IPR002470 GO:0004252|GO:0006508
Cca06g00504 859 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 714 736 IPR002470 GO:0004252|GO:0006508
Cca06g00504 859 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 695 710 IPR002470 GO:0004252|GO:0006508
Cca06g00504 859 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 553 571 IPR002470 GO:0004252|GO:0006508
Cca06g00504 859 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 579 603 IPR002470 GO:0004252|GO:0006508
Cca06g00504 859 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Cca06g00504 859 PANTHER PROLYL OLIGOPEPTIDASE FAMILY PROTEIN 28 779 - -
Cca06g00504 859 Gene3D - 117 468 - -
Cca06g00504 859 SUPERFAMILY alpha/beta-Hydrolases 524 744 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00504 Cca-Chr6 15324366 15332354 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00504 - - gmx:100779514 1380.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00504 06 15324366 15332354 Cca06g00504 06 15324366 15332354 ECH