Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00503 ATGGTCTACAACAAGGTTGTTTTTGAGGATTCAAAGCTAGAGGAGAGTAGAAAGGGGAGGCCATATGGTAAGATGAGAAATGTAGAACTAATGGAAGCTGAGACTCTGAAGGGTTTGTTCATTGGAGGGGTCAAGAATGAGAAATTCAAAGGATTGTTGAATGATGAGATCAAGGGTGACAAACTCAGATTTGTCATGTTTGATCGTAAGAGATCATCCCAGTTAAGGCTTTGGACACTTCGAGCAGTGCTTTTGATGATGCTTTGGACCATAGTGGTGCAATTCAAAGGCCTTGGTGACAAGGTAACACATGCCATGTTCATCAAGACATCTCTACCACCTCAAAGGATTTACGAGAATAATAATGGGTATCTAATGGTTTCTTCCAATGGAGGATTGAATCAAATGCGAGCTGGAATATGTGATATGGTTAGCATTGCAAGATATTTAAATGTTACACTAATAGTTCCTGAGCTGGATAATACCTCTTTTTGGAATGATCGAAGCCAATTCCAAGATATATTTGATGTGGATTATTTCATCAATTCTTTGAGAGATGAGGTTCGGATATTGAAAGAGCTTCCTCCCCAACAAAAGCATAAGGTGGAAACAGAGTCCCTCTATTCCATGCCACCCATTAGTTGGTCTAATATGACATATTATTATGATGTGATTCTTCCCCGGATGAAAACATATGGGCTAGTACACTTCACTAAATCTGATGCAAGACTTGCAAATAATGGGATTCCTGAGGAAGTTCAGAAACTTAGGTGCCGAGTGAACTACCATGCTTTGAGATTTGTTTCTCCAATTGAGCAATTGGCTAAGAAGATTGTGAAGATTCTCAATGAGAGAGGGCCTTTCTTGTCACTTCATCTTAGATATGAAATGGACATGATAGCTTTCACTGGTTGCAATGAAGGATGCAACAATGAAGAGATTGATGAGTTAACAAAAATGAGATATGCTTATCCATGGTGgaaagagaaagagatagattctgagaagaaaagaaaagaTGGTCTATGCCCTCTGACTCCTGAGGAAACTGCTCTAACACTGCGTGCATTGGACATTGATCATAATATTCAAGTTTATATTGCAGCTGGGGAAATATACAAATCAGAGAAAAGAATGGCAAGTCTCAAAGAAGCCTTCCCAAATCTGGTTAAGAAGGAGACATTATTGGAACCCTCAGAGCTTGATCCTTTACGGAACCATTCAAACCAAATGGCAGCATTGGATTATTATGTGTCAATAGAAAGTGACATATTCGTTCCCTCATACAAAGGGAACATGGCAAAACTGATTGAGGGCCATAGAAGGTACTTGGGATTCAAGAAGACAATTATTTTAAACAGAGAACTTCTGGTTGAACTCATAGATCAGTACAAAAATGGGACCATAAGTTGGAACCAGTTCACCATTTCAGTGAAGGTGGCTCATGCAGATCGAGTAGGGAACCCAACTACAAGATCAGTGGTACCTGGAAACCCCAAAGAAGAGGACTATTTCTACACAAACCCACAAGAGTGCTTGTCACCACTTGATGGACCATAA 1560 0.3891 MVYNKVVFEDSKLEESRKGRPYGKMRNVELMEAETLKGLFIGGVKNEKFKGLLNDEIKGDKLRFVMFDRKRSSQLRLWTLRAVLLMMLWTIVVQFKGLGDKVTHAMFIKTSLPPQRIYENNNGYLMVSSNGGLNQMRAGICDMVSIARYLNVTLIVPELDNTSFWNDRSQFQDIFDVDYFINSLRDEVRILKELPPQQKHKVETESLYSMPPISWSNMTYYYDVILPRMKTYGLVHFTKSDARLANNGIPEEVQKLRCRVNYHALRFVSPIEQLAKKIVKILNERGPFLSLHLRYEMDMIAFTGCNEGCNNEEIDELTKMRYAYPWWKEKEIDSEKKRKDGLCPLTPEETALTLRALDIDHNIQVYIAAGEIYKSEKRMASLKEAFPNLVKKETLLEPSELDPLRNHSNQMAALDYYVSIESDIFVPSYKGNMAKLIEGHRRYLGFKKTIILNRELLVELIDQYKNGTISWNQFTISVKVAHADRVGNPTTRSVVPGNPKEEDYFYTNPQECLSPLDGP 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00503 519 PANTHER OS02G0726500 PROTEIN-RELATED 32 518 - -
Cca06g00503 519 PANTHER O-FUCOSYLTRANSFERASE FAMILY PROTEIN 32 518 - -
Cca06g00503 519 CDD O-FucT_plant 124 449 IPR024709 -
Cca06g00503 519 PIRSF UCP009360 43 111 IPR024709 -
Cca06g00503 519 PIRSF UCP009360 98 510 IPR024709 -
Cca06g00503 519 Pfam GDP-fucose protein O-fucosyltransferase 124 444 IPR019378 -
Cca06g00503 519 Gene3D - 254 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00503 Cca-Chr6 15315819 15321718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00503 115 513 Miscellaneous Gene Families AT2G37980 46.766 2.35e-125 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00503 K23280 - gmx:100818153 884.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00503 06 15315819 15321718 Cca06g00503 06 15315819 15321718 ECH