Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00501 ATGGAGAAGAAAACAAGTGCCCAAGAGTCACGCATATTGAACCAAATATTTTTCCCTAAGCAACTCAACAAAGTATACCCAATTAGGCTTCAAAGAAGCtcttcaacttcatccttatcgtccttatcatcatcatTGTCACAAAATTCAGATGACTCTTCCATAACAGATTCTTTGAATCTAGTGGATGACAATTTTCAATTTGCACTGAATTTGATTTCACCGCACCGAAAAAGAAGAGAACCAGGTGTTACTAATACTTCGCACCAACAACATAGTCCATATACTACTGAACTTGGTGAATTGAAAAGGTGTAACTGGATTACAAAGAACTGTGATAAAACATACATTGAATTTCACGATGAGTGTTGGGGAGTCCCGGCTTACGATGACAAAAAGTTGTTCGAGCTGCTTACATTGTCAGGATTGCTGATAGATTACAACTGGACAGAAATTCTAAAAAGAAGGGGAATTCTTAGACACGTTTTTGCCGGATTTGATCCAAATACTGTGGCCAAAATGGATGAGAAAGAAATCATGGAAATAGCATCAAACAAGGATGTTTTATTAGCCGATTGCAGAGTTAGGTGCATAATAGACAACGCCAAATGCATAATGAAGATTGTGAGGGAATGTGGATCATTCAGCAGCTATATATGGGGTTATGTGAATCACAAACCAGTGATTAACAGATATAGATACGCAAGAGATGTCCCTCTAAGGACTCCAAAAGCAGATACCATCAGCAAGGACTTGATAAAGCGTGGCTTTCAATTTTTGGGTCCAGTGATAGTTTATTCTTTTATGCAAGCTGCAGGATTGACAATTGATCATCTTGTGGATTGTTATAGGCACAATGAATGTGTAAGCCTAGCAGAAAGACCTTGGAGGCATTTGTAA 900 0.3678 MEKKTSAQESRILNQIFFPKQLNKVYPIRLQRSSSTSSLSSLSSSLSQNSDDSSITDSLNLVDDNFQFALNLISPHRKRREPGVTNTSHQQHSPYTTELGELKRCNWITKNCDKTYIEFHDECWGVPAYDDKKLFELLTLSGLLIDYNWTEILKRRGILRHVFAGFDPNTVAKMDEKEIMEIASNKDVLLADCRVRCIIDNAKCIMKIVRECGSFSSYIWGYVNHKPVINRYRYARDVPLRTPKADTISKDLIKRGFQFLGPVIVYSFMQAAGLTIDHLVDCYRHNECVSLAERPWRHL 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00501 299 Gene3D Hypothetical protein; domain 2 102 286 - -
Cca06g00501 299 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE I 1 299 - -
Cca06g00501 299 PANTHER OS04G0501200 PROTEIN 1 299 - -
Cca06g00501 299 SUPERFAMILY DNA-glycosylase 103 289 IPR011257 GO:0003824|GO:0006281
Cca06g00501 299 Pfam Methyladenine glycosylase 107 285 IPR005019 GO:0006284|GO:0008725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00501 Cca-Chr6 15190962 15194447 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00501 K01246 - gmx:100817116 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00501 06 15190962 15194447 Cca06g00501 06 15190962 15194447 ECH