Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00428 ATGGCGGCAAATACAGTCTATAGTGCGCCTCTGTTCCTTCCTCCTCTGTCACACTCACACAAAACCCCTAAACCTATTCACTCCCTCTGCTTCAACCCTCCTCCAATTACCCTCTTCAGCTCTAAGTTTTCTGCTGCACTAGTCGCACCACCAAAGCTTCTCCGTCCAGTGTTCACAGTAAATGGGTTCGTGGGTGATGATTCTCTCACTGCCCCGGAACCGCAATCGCCCAATTCTGAAGCGGGTGCTAGTATTGACTTAAAACTTCCGAGAAGAAGTTTGCTTGTAGAATTTACATGTGACTTGTGTGGTGAAAGAACAAAGAGGCTTGTTAACCGCTTAGCTTATGAAAGGGGTGCCGTTTTTGTACAGTGTGCAGGATGTCGACGGCATCATAAACTAGTTGACAATCTTGGACTTATCACAGAGTATGACTTTCGGGAGAATATAAGCATAGACTCAGAAACTGATCAAGTTTGA 480 0.4562 MAANTVYSAPLFLPPLSHSHKTPKPIHSLCFNPPPITLFSSKFSAALVAPPKLLRPVFTVNGFVGDDSLTAPEPQSPNSEAGASIDLKLPRRSLLVEFTCDLCGERTKRLVNRLAYERGAVFVQCAGCRRHHKLVDNLGLITEYDFRENISIDSETDQV 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00428 159 Pfam DNL zinc finger 96 147 IPR007853 GO:0008270
Cca06g00428 159 PANTHER F24J5.3 17 158 - -
Cca06g00428 159 ProSiteProfiles Zinc finger DNL-type profile. 89 159 IPR007853 GO:0008270
Cca06g00428 159 PANTHER UNCHARACTERIZED 17 158 IPR024158 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00428 K17808 - gmx:100786613 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00428 06 13417446 13422754 Cca06g00428 06 13417446 13422754 ECH