Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00395 ATGGCTTCCATGAGCTCTCTGAAAATGATTTCGTCCCTCAAACTCTCTCATTCAAGTTCCATCTCTCCTCTTCAAACCCAAAAGCAAGTAGGTTCTAGTCTCTTTCAATCCTTCCCAACCAGAACTTTAAAATTCGCAGGTACCCCGCTAGTATCTACAACCAGAAGAAGTCACAACAACACAACCACTGCATTCTTCTTCAATAACTCAAAGCAGCATCAAGATTCTTCAAAGCCAGCCAAAGTTCAAGAACTCTTTGTCTATGAGATCAATGAACGTGACAGAGGAAGTCCTGCATACCTCAGGCTAAGCCAGAAGGCAGTTAACTCTCTAGGAGATTTAGTGCCATTCAGCAACAAGTTATACTCTGGAAACTTGGAAAAGAGAATAGGGATAACTGCAGGCTTATGTGTGCTCATACAGCATGTTCCTGAGAAAAAGGGTGACAGATATGAGGCCATTTACAGCTTCTACTTTGGAGACTATGGCCACATATCAGTGCAAGGAGCTTATCTGACATACCAAGACACATATCTGGCTGTAACAGGAGGCTCTGGAGTCTTTGAAGGTGTGTCTGGACAGGTGAAACTTCAGCAACTTGTGTTCCCTTTCAAGCTTTTCTACACCTTCTACTTGAAGGGTATTCCTGATTTGCCGGCTGAGCTACTTGGGAACCCTGTTGAACCTTCACCAAAGGTTGAGCCATCTCCAGCTGCTAAGGCTGCTGAGCCTCATGCCTCTATTCCAAACTTCACCAACTGA 762 0.4436 MASMSSLKMISSLKLSHSSSISPLQTQKQVGSSLFQSFPTRTLKFAGTPLVSTTRRSHNNTTTAFFFNNSKQHQDSSKPAKVQELFVYEINERDRGSPAYLRLSQKAVNSLGDLVPFSNKLYSGNLEKRIGITAGLCVLIQHVPEKKGDRYEAIYSFYFGDYGHISVQGAYLTYQDTYLAVTGGSGVFEGVSGQVKLQQLVFPFKLFYTFYLKGIPDLPAELLGNPVEPSPKVEPSPAAKAAEPHASIPNFTN 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00395 253 MobiDBLite consensus disorder prediction 229 253 - -
Cca06g00395 253 SUPERFAMILY Allene oxide cyclase-like 81 253 IPR034871 GO:0009695|GO:0046423
Cca06g00395 253 Pfam Allene oxide cyclase 78 251 IPR009410 GO:0016853
Cca06g00395 253 PANTHER ALLENE OXIDE CYCLASE 4, CHLOROPLASTIC 2 253 - -
Cca06g00395 253 Gene3D - 67 253 IPR044859 -
Cca06g00395 253 PANTHER ALLENE OXIDE CYCLASE 4, CHLOROPLASTIC 2 253 IPR009410 GO:0016853
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00395 Cca-Chr6 12291616 12293227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00395 60 253 Acyl Lipid Metabolism Gene Families AT3G25780 68.367 9.80e-95 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00395 K10525 - gmx:100775373 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00395 06 12291616 12293227 Cca06g00395 06 12291616 12293227 ECH