Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00374 ATGGCTTCAAACCCAGAAGCATACAAGCCATATGGGAAGCAACCCACCAAGGGACAATGGACCACTGGTCTCTATGATTGTTGGGATGACCCCTCTCATTGTTGCTTCACATGCTGTTGTCCATGCATCACGTTTGGGCAGATTGCGGAGATTGTTGATGAAGGGACAATATCCAAAAATGCAGCATGTTGCATTTATATTTTCACACACGAGGGGATGAAATGGCTATATGGTGCAACTTACAGATCCAAATTGAGACGATTGTTCTCACTGCCACAGGAACCCTACTCTGATTCATTTGTTCATTGTTGTTGTTGCATTTGTTCCCTCACACAAGAATACAAAGAACTCAAAAACCGTGGAATTGATCCTTCCATTGGTTGGGAAGGTAACGTTGAGAAGTGGAAGAGGGAAGGCGTAGACCCTCCAATTGTTCCCACCATGTCTCGTTGA 453 0.4459 MASNPEAYKPYGKQPTKGQWTTGLYDCWDDPSHCCFTCCCPCITFGQIAEIVDEGTISKNAACCIYIFTHEGMKWLYGATYRSKLRRLFSLPQEPYSDSFVHCCCCICSLTQEYKELKNRGIDPSIGWEGNVEKWKREGVDPPIVPTMSR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00374 150 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 19 119 IPR006461 -
Cca06g00374 150 PANTHER PROTEIN PLANT CADMIUM RESISTANCE 9-LIKE 15 149 - -
Cca06g00374 150 PANTHER DUF614 FAMILY PROTEIN-RELATED 15 149 IPR006461 -
Cca06g00374 150 Pfam PLAC8 family 20 116 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00374 Cca-Chr6 11322153 11324926 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00374 - - ccaj:109793155 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00374 06 11322153 11324926 Cca06g00374 06 11322153 11324926 ECH