Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00331 ATGGTGCTGCGCGGTTCCGAGCAACAGAGAGGGGCCACTCCCAACCGATCCAACTCGCTCCACAATTTCCCCTTCTTGAAGTGGGGGAATCAGCGCAAGATGAGGGAATCCGGTGAAAAGCGGCGACACGGCGGCGACGGGGACGGGATCGCGGTGGTGCGGCAGAGGCTGATCCTCGATCTGAAGACCGAAGCGGATAGAATGAAAGACGCGATTCTACGAAGCGAAGAAGAAGCTGTGAGGCCGTGGAATCTGAGGAAGAGAAGAGCCAAGGTTGAGGCTCCGGTGCCCGACGCGTTGAAGATCGGCGACAAGAAGCGAAACCACTCGCCgccgcagccgcagccgcagccgcagccgcagccgcagccgcagccgcagccgcagccgcCGAGACACGACGGCGCGTCCAAGTTGCCGCAACTGAGAAGCGGATCCGACAAGACGGTAAAGGTCAAGTTCTCTTTCCAGCTATCGAGGAAAGAGGTTGAGGAAGATTTCGTGGCCATCTTGGGCCACCGGCCTCCCCGGAGGCCCAATAAGAGGCCCAAACTCGTGCAGAAGCAGTTGGATACGCTTTTCCCTGGGCTGTGGTTGACGGAGGTTACGGCAGATTCGTACAAGGTTATTGAGAATGGCAAGGTGCGTCACAATGGGAAGCGGAAAGTTGACGCTGGATTTTGA 684 0.519 MVLRGSEQQRGATPNRSNSLHNFPFLKWGNQRKMRESGEKRRHGGDGDGIAVVRQRLILDLKTEADRMKDAILRSEEEAVRPWNLRKRRAKVEAPVPDALKIGDKKRNHSPPQPQPQPQPQPQPQPQPQPPRHDGASKLPQLRSGSDKTVKVKFSFQLSRKEVEEDFVAILGHRPPRRPNKRPKLVQKQLDTLFPGLWLTEVTADSYKVIENGKVRHNGKRKVDAGF 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00331 227 MobiDBLite consensus disorder prediction 32 47 - -
Cca06g00331 227 Pfam Protein of unknown function (DUF1639) 158 207 IPR012438 -
Cca06g00331 227 PANTHER OS01G0688600 PROTEIN 12 211 - -
Cca06g00331 227 MobiDBLite consensus disorder prediction 90 150 - -
Cca06g00331 227 PANTHER PUTATIVE (DUF1639)-RELATED 12 211 - -
Cca06g00331 227 MobiDBLite consensus disorder prediction 1 47 - -
Cca06g00331 227 MobiDBLite consensus disorder prediction 8 25 - -
Cca06g00331 227 Coils Coil 58 78 - -
Cca06g00331 227 MobiDBLite consensus disorder prediction 111 133 - -
Cca06g00331 227 MobiDBLite consensus disorder prediction 90 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00331 Cca-Chr6 9306271 9307439 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00331 - - pvu:PHAVU_003G036300g 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00331 06 9306271 9307439 Cca06g00331 06 9306271 9307439 ECH