Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00236 ATGGAACCAGCACAGAATCAGAGACCAGCGACAACGTCCACACCATCGCGCTCTTTCCAGTTCCACCCTGCTCGTGGCCCCATTCTTGATCTCTTCAACCTCTACTTAGGACTCGGCCGAAATAGCCGCCAGAAACCCGAAGAGTCACTTCGCGAACCACCGAACAAGACACACAAACGAGTACATGCTCTTAATCGGGAGCTTCCTCCACCAAATGAGCAGTTCATTATAGATTTTGAGCAACTCCAGAGCCAATTTCCTGACCAAGATCAATTACGTTCTGTTACAGAAACGATTCTTATATCGTTAGTAGTGCAGTGTAGTGGTCATGGACCCAGGGCAGACTTTCTTCTTTTTGTTTTACGGAGCTTATGGGGTATTGGATGCATTAACTGGGACTCCCTTCTGCCGTCCCTTCTTTCTTCAGTTTCTTCGGCAGAATTGCCTGTTGGTCAACTGAGTCAAGCAGTGCCAACTGTTTCCTCATCGAGCTTGTCTCAGGCAGGAATGCTGCCACCTTCTAGCACAATTGCCAATTCTTCTAATTTTCAGTCTTCAAATCCTGCATCTCCTTTGACCTCTGTTCATACTATTGGCTCTCCTGCGCAGCCAACGATTGAACCATTATCTTGTGCAGCCATGTCTCCTGTTAAATCGTCAGATGTTTCCTCTACTGGACAACAATCTAAACTAAGAGGCAGTCCATCTGTTAGAAATAATGATATCAGTAATAGTAGCCTTCGCCAGCTATGTTGCAAGATTATTTTAACTGGTCTTGAGTTCAGTTTAAAACCAGTGACTTATGCTGAAATCTTCCACCATATGCTGCATTGGCTGGTGAATTGGGACCAGAGGCAACAGGGAATTGATGAATCTGATATAATAAAATCGTGGAGACCTGACAAAGCTGTAATTGCATGGCTACACAGTTGCTTGGATGTGATTTGGCTTTTAGTTGATGAGGGAAAAATATGTCGAGTGCCCTTTTATGAATTATTACGTAGTGATTTGCAATTCATAGAGAATATTCCTGATGATGAAGCATTGTTCACACTTATCTTGGAGATCCACAGGAGAAGAGACATGATGGCCATGCACATGCAAATGTTAGACCAGCATCTTCACTGCCCTACATTTGGGACTCATCGGATCCTGACTCAAACAATGCCTAATGTTTCAGGTGAAGCAGTAGCAAATCAGCGACTATCACCAATTACATATTTAAGTGTACTTGGAGAACCATTGCATGGAGAGGATATTGCATCCTCTATTCAGAAGGGAAGTTTGGACTGGGAAAGAGCTGTGCGTTGCATAAGGCATGCTCTTCGTACTACACCATCACCTGATTGGTGGAGGCGCGTGCTGGTATTGGCTCCTTGCTATAGGTCTCCGTCTCAAGTGCCTACTGCTGGTGCTGTTTTTTCTTCAGAGATGATCTGTGAAGCAACTATTGATAGAATTGTTGAACTACTGAAAATGACAAATTCAGGCAATAATCTTTTCTCTATCTCTTTATTATATATAAATTGCTGGCAGGACTGGCTGGTTTTCGCTGATATTTTCTATTTTCTTATTAAAAGTGGGTGCATTGATTTTGTCGATTTTGTGGACAAGCTGGTTTCACGTCTTACAGATGGTGATCATCATATTCTCAAGACAAATCATGTTACTTGGTTGCTTGCACAGATAATTCGAATTGAGCTGGTCATGAATGCTTTGAATTCTGATTCTAGAAAGGTAGTGGAGACAACCAGAAAGATTTTATCATTCCATAGAGAAGACAGAACCTCAGATCCTAATAATCCTCAAAGTGTCTTGCTTGATTTTGTAAGCAGCTGTCAAAATTTACGTATTTGGTCGCTGAACTCGTCAACCAGAGAATATCTGAACAATGAACAGCTTCAAAAAGGAAAACAAATAGATGAATGGTGGAGACAAGCAAGCAAAGGGGACAGAATGATGGATTATATGAATATGGATGAACGCTCAATAGGGATGTTTTGGGTTGTGACCTACACAATGGCACAGCCTGCTTGTGAAACAGTAGTGAATTGGTTAACTTCTGCTGGAGTTGCCGACTTACTGCCAGGAACAAATCTACAACCGGGTGAGAGATTAATGGCTACAAGAGAAGTGAGCCCACTGCCCATGTCATTGTTATCGGGATTTTCACTCAACTTATGTATGAAGCTATCTTATCAAATGGAAGACAATCTATTTTCTGGGCAGGTTGTTATACCCAGCATTGCAATGGTTGAAACTTATACTAGATTGTTGCTCTTGGCACCTCATTCACTTTTTCGTTCACATTTCAATCATTTGGTGCAAAGAAATCCTTCTTTCTTGAGCAAACCTGGGGTAACACTGTTAGTGCTTGAGATCTTGAACTACAGACTGCTTCCACTATACAGGTACCAGGGAAAAAGCAAAGCCCTGATGTATGATGTTACAAAGATCATTTCGGCTATAAAAGGAAAACGAGGAGACCATCGAGTATTCAGATTAGCTGAAAATTTGTGCCTGAATCTTATTTTCTCTTTGAGAGATTTCTTCTTTGTTAAAAGGGAAGGAAAGGGCCCAACAGAATTTACTGAAACTTTGAATCGAGTGACTGTTATAACACTTGCTATCCTTATAAAAACTCGTGGGATTGCTGATGCTGATCACATGCTTTATCTGCAAAATATGTTGGAACAAATAATGGCAACTAGCCACCATACATGGTCAGAAAAAACACTACATCACTTCCCTGCTGTTCTGCGTGATGCATTGAGTGGTCGAAGTGATAAAAGGAGCCTTGCAATACAGACATGGCAGCAGGCAGAAACCACTGTAATAAACCAGTGCACCCAGCTTCTTTCACCATCAGCTGATCCTAGTTATGTTATGACCTATATCAGTCATAGTTTCCCTCAGCATCGACAGTATCTTTGTGCTGGTGCATTAATATTAATGCATGGTCATGCAGAAAACATTAACAGTGGAAACCTGGGACGCGTCCTGCGGGAATTCTCTCCGGAAGAGGTGACATCTAACATTTACACAATGGTGGATGTTCTGCTTCATCATATGCAAATAGAGCTTCAACAAGGACACTCCTTACAGGACCTTCTGTTAAAAGCTTGTGTAAGCCTTGCCTTTTTTGTTTGCACAAATGAGTTACTTCCTTTGGACATCTTGCTTCTGGCACTTATTGACCGTGATGATGATCCACATGCTTTGCGTATTGTGATTAGTCTACTTGATAGGCAAGAGCTTCAGCAAAGAGTAAAACTCTTTTGCTTAACTCGTGGGCACCCTGAACATTGGCTATACTCAGGAATATTCAAGCGGGTTGAGCTACAAAAGGCTCTGGGAAATCACCTTGCATGGAAGGATAGGTATCCAGTGTTCTTTGATGATATTGCAGCACGTTTGCTTCCAGTCATCCCCTTAATCATTTATAGACTTATCGAAAATGATGCAATGGATACAGCAGAAAGACTATTAGCCATGTATTCTCCATTGCTTGCTTATTATCCTCTAAGATTTACATTTGTCCGTGATATACTTGCATACTTCTATGGTCATCTTCCTGGAAAGCTCATTGTTCGAATCCTCAATGTACTTGACATCAGTAAGATTCCCCTTTCAGAGTCATTCCCACAACAAATAAGTTTGACAAATCCTGTCATGTGCCCTCCTTTGGATTATTTTACGACTCTGTTACTGGGAATAGTGAATAATGTTATTCCTCCATTACATAACAATTCAAAATCTGGATCTATAGGAGATGCATCAAACAATACATTGCGTACTGCACAAAGCAAGCCTCCAGTATCTCAGTCTGGTCCAGCAAATGCTTCGGAGGGCCAAAAGGCATTTTACCAAATTCAGGATCCTGGCACATACACTCAGTTGGTTCTTGAGACTGCAGTTATTGAAATACTTTCCCTTCCCGTATCTGCCTCTCAGATAGTACAATCACTTGTTCAAATTGTGGTTAATATACAACCAACCTTGATCCAGTCCAGCAATGCTCTCCATGGTGGTTCAAATAGTGTAGGGCAGGGTTCAGTATTGCCAACATCACCTTCAGGGGGAAGCACAGATTCCTTAGGTGCAAGCAGATCAACTCCTACAGTTTCTGGAATAAATACCTCTAATTTTGCATCTCGAAGTGGTTATACAAGTCAACAACTGTCTTGCTTGTTAATTCAAGCTTGTGGCCTCCTGCTGGCTCAGCTTCCATCTGATTTTCACTCACAACTTTACTTGGAAACAACGCGTATTATAAAAGAGAACTGGTGGCTTAAGGATGGAACAAGGTCGCTTGGTGAAATAGACTCTGCCGTTGGCTATGCTTTGTTAGATCCAACATGGGCTGCACAGGACAATACCTCCACAGCCATTGGGAATGTGGTGGCATTGCTTCATTCTTTCTTCAGTAACCTCCCTCAAGAATGGCTTGAAGGGACCAATGCTATTATCAAGCAACTTCGGCCAGTAACATCAGTCGCAATGTTGAGGATTGCATTCCGTATAATGGGACCACTCCTTCCAAAACTTGCCAATGCTCATGCACTTTTCAATAAGACCCTTTCATCACTACTAAGCATATTAGTGGATGTATTTGGGAAAAATTCCCAGACACCTATTGCCGTTGACGCATCAGACATAGCAGATATCATTGACTTCCTCCATCATGTCGTCCATTATGAGGGACAGGGAGCGCCTGTGCAGGCTAGCAGCAAACCACGACCAGAGGTTTTGGCTCTCATTGGAAGGGCATCAGAGAGTTTACGTCCAGACATTCAACATTTGCTTGCACACCTAAATACTGATGTTCATTCCTCTGTTTATGCGGCATCTCATCCCAAGTTAGTCCAGAATCCAACTTAG 4881 0.421 MEPAQNQRPATTSTPSRSFQFHPARGPILDLFNLYLGLGRNSRQKPEESLREPPNKTHKRVHALNRELPPPNEQFIIDFEQLQSQFPDQDQLRSVTETILISLVVQCSGHGPRADFLLFVLRSLWGIGCINWDSLLPSLLSSVSSAELPVGQLSQAVPTVSSSSLSQAGMLPPSSTIANSSNFQSSNPASPLTSVHTIGSPAQPTIEPLSCAAMSPVKSSDVSSTGQQSKLRGSPSVRNNDISNSSLRQLCCKIILTGLEFSLKPVTYAEIFHHMLHWLVNWDQRQQGIDESDIIKSWRPDKAVIAWLHSCLDVIWLLVDEGKICRVPFYELLRSDLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILTQTMPNVSGEAVANQRLSPITYLSVLGEPLHGEDIASSIQKGSLDWERAVRCIRHALRTTPSPDWWRRVLVLAPCYRSPSQVPTAGAVFSSEMICEATIDRIVELLKMTNSGNNLFSISLLYINCWQDWLVFADIFYFLIKSGCIDFVDFVDKLVSRLTDGDHHILKTNHVTWLLAQIIRIELVMNALNSDSRKVVETTRKILSFHREDRTSDPNNPQSVLLDFVSSCQNLRIWSLNSSTREYLNNEQLQKGKQIDEWWRQASKGDRMMDYMNMDERSIGMFWVVTYTMAQPACETVVNWLTSAGVADLLPGTNLQPGERLMATREVSPLPMSLLSGFSLNLCMKLSYQMEDNLFSGQVVIPSIAMVETYTRLLLLAPHSLFRSHFNHLVQRNPSFLSKPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAIKGKRGDHRVFRLAENLCLNLIFSLRDFFFVKREGKGPTEFTETLNRVTVITLAILIKTRGIADADHMLYLQNMLEQIMATSHHTWSEKTLHHFPAVLRDALSGRSDKRSLAIQTWQQAETTVINQCTQLLSPSADPSYVMTYISHSFPQHRQYLCAGALILMHGHAENINSGNLGRVLREFSPEEVTSNIYTMVDVLLHHMQIELQQGHSLQDLLLKACVSLAFFVCTNELLPLDILLLALIDRDDDPHALRIVISLLDRQELQQRVKLFCLTRGHPEHWLYSGIFKRVELQKALGNHLAWKDRYPVFFDDIAARLLPVIPLIIYRLIENDAMDTAERLLAMYSPLLAYYPLRFTFVRDILAYFYGHLPGKLIVRILNVLDISKIPLSESFPQQISLTNPVMCPPLDYFTTLLLGIVNNVIPPLHNNSKSGSIGDASNNTLRTAQSKPPVSQSGPANASEGQKAFYQIQDPGTYTQLVLETAVIEILSLPVSASQIVQSLVQIVVNIQPTLIQSSNALHGGSNSVGQGSVLPTSPSGGSTDSLGASRSTPTVSGINTSNFASRSGYTSQQLSCLLIQACGLLLAQLPSDFHSQLYLETTRIIKENWWLKDGTRSLGEIDSAVGYALLDPTWAAQDNTSTAIGNVVALLHSFFSNLPQEWLEGTNAIIKQLRPVTSVAMLRIAFRIMGPLLPKLANAHALFNKTLSSLLSILVDVFGKNSQTPIAVDASDIADIIDFLHHVVHYEGQGAPVQASSKPRPEVLALIGRASESLRPDIQHLLAHLNTDVHSSVYAASHPKLVQNPT 1626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00236 1626 PANTHER BNAA09G30010D PROTEIN 7 167 - -
Cca06g00236 1626 PANTHER BNAA09G30010D PROTEIN 217 1620 - -
Cca06g00236 1626 MobiDBLite consensus disorder prediction 216 240 - -
Cca06g00236 1626 MobiDBLite consensus disorder prediction 1254 1281 - -
Cca06g00236 1626 Pfam Mediator complex subunit 23 518 1193 IPR021629 -
Cca06g00236 1626 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23 7 167 IPR021629 -
Cca06g00236 1626 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23 217 1620 IPR021629 -
Cca06g00236 1626 MobiDBLite consensus disorder prediction 1 20 - -
Cca06g00236 1626 MobiDBLite consensus disorder prediction 176 197 - -
Cca06g00236 1626 MobiDBLite consensus disorder prediction 1 22 - -
Cca06g00236 1626 MobiDBLite consensus disorder prediction 1346 1374 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00236 K15166 - gmx:100798789 2992.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00236 06 6031314 6093619 Cca06g00236 06 6031314 6093619 ECH