Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00232 ATGGCTTCCTCGATTAGCTCAGTGAACAAAAACCAAGAGGGAGTAGCCAGTGGCGTTGAGGAAAAACCCATCCCACTTAATGAGAACGTTCTGCAGAAGCATGCTGCATTCTTTGACATGAATAAAGATGGTGTCATTTACCCATGGGAGACTTTTCAAGGTTTGCGTGAAATTGGGACTGGGATTTTGTTGTCTGTTGGAGGTGCTGCTTTCATCAACTTATTTCTCAGTCAGGGAACTCGTCCTGGAAAGTTTCCATCTTTACTTTTTCCAATTGAAATTAAAAACATCCAATTGGGCAAACATGGAAGTGACTCCGGAGTCTATGATACCGAAGGAAGGTTTGTTCCTTCAAAATTTGAAGAAATTTTCACTAAGCATGCGCATACACATCCAAATGCTTTGACATATGATGAGTTGAAGGAGATGATGAAAGCCAACAGAGAGCCTAAAGATTTAAAAGGAAGGATTGGAAGTTTTGCTGAATGGAATCTCCTTTACAAACTTGCTAAAGATAAGAATGACTTACTGCAAAAGGAAACAATTCGAGGTGTTTATGATGGAAGCTTGTTTGAACAACTGAAAAAGCTACACTCTGAAGATAAAAAGAAaaaattacattggcgtcaaacttag 636 0.3774 MASSISSVNKNQEGVASGVEEKPIPLNENVLQKHAAFFDMNKDGVIYPWETFQGLREIGTGILLSVGGAAFINLFLSQGTRPGKFPSLLFPIEIKNIQLGKHGSDSGVYDTEGRFVPSKFEEIFTKHAHTHPNALTYDELKEMMKANREPKDLKGRIGSFAEWNLLYKLAKDKNDLLQKETIRGVYDGSLFEQLKKLHSEDKKKKLHWRQT 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00232 211 Pfam Caleosin related protein 28 194 IPR007736 -
Cca06g00232 211 PANTHER CALEOSIN 3 204 - -
Cca06g00232 211 PANTHER PEROXYGENASE 3-RELATED 3 204 IPR007736 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00232 Cca-Chr6 5877401 5883689 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00232 1 205 Acyl Lipid Metabolism Gene Families AT1G70670 59.512 2.67e-82 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00232 K17991 - gmx:100799842 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00232 06 5877401 5883689 Cca06g00232 06 5877401 5883689 ECH