Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00209 ATGGCGGAGGTTTCCGGCGACGGCGCGGCGCTGTCGGTGTCGGGATCGTTCAGGGAGGGGAGAGGCTCGGCGCGGCGGCGCGGAGGAGTGCGGCCGCCGAGCATGGACGCCGACGAGTTCATGAACCTGCTGCACGGTTCGGATCCGGTGAAGGTGGAGCTCAATCGCCTCGAGAATGAAGTTCGAGATAAGGACAGGGAATTATCGGAAGCGCAGGCTGAGATCAAAGCCTTGAGGCTCTCCGAACGACTCAAAGAAAAAGCCGTTGAAGAGCTGACGGAAGAACTGTCAAAGGTTGACGGAAAGCTAAAACAAACAGAATCTCTTCTAGAAAGCAAGAATCTTGAAATCAAAAAAATCAGTGATGAAAAGAAAGCATCAATGGCAGCTCAGTTTGCAGCTGAAGCCACTCTTCGGAGGGTCCATGCTGCCCAGAAAGATGATGACATGCCTCCAATAGAAGCAATTCTTGCTCCTTTGGAGGCTGAACTCAAGCTTGCTCGACAAGAGATTGCCAAACTACAAGATGATAACAAAGCTTTAGATCGTCTTACCAAATCTAAAGAAGCTGCACTACTTGAAGCGGAGAGGACTGTCCAGGTTGCCTTGGCTAAGGCCTCCATGGTGGATGATCTGCAGAACAAAAATCAAGAGCTAATTAAACAGATTGAGATTTGTCAGGAAGAAAATAAAATTTTGGACAAAATGCACAGACAGAAGGTGGCAGAGGTTGAAAAGCTCACCCAAACTGTGAGAGAACTAGAAGAGGCTGTCCTTGCAGGTGGTGCAGCTGCAAATGCAGTCAGAGATTATCAGCGGAAAGTTCAAGAAATGAATGAAGAAAGAAAAACTCTAGACAGGGAGTTGGCCCGTGCCAAGGTAACAGCAAACAGAGTAGCTGTTGTGGTTGCAAATGAGTGGAAAGACGCTAATGATAAAGTAATGCCTGTCAAACAATGGCTTGAAGAACGTCGATTCTTGCAGGGAGAAATGCAGCAACTTCGAGACAAGCTTGCTATAGTTGAGCGTGCTGCAAAATCTGAAGCACAGTTGAAAGAAAAATATCATTTACGACTTAAAGTGCTAGAGGAGAGTTTAAGAGGAAATTCTAACAGTAGTATTCGCGGCACTCCAGAGGGAAGAAGTGTAAGCAATGGCCCTTCTCGTCGTCAATCCCTAGGTGGAGCTGATAACTTCTCAAAACTAACCTCTAATGGGTTCTTATCTAAGAGGACACCATCCTCTCAACTGAGGTCATCCCTATCCTCTAGCACAGTTTTGAAGCATGCTAAAGGAACATCTAAATCATTTGATGGCGGTACAAGATCACTGGAAAGGAGTAAAATGCTGCTGAATGGAACATCTCCAAGTTACTCATTCAACCAATCTCTTGAAGAAACCAAAGAGAGAGAGGGAAGTGATAATTGGAAAGGAAATTCAGATGATAAACCAAATGACCTCCCAACAGTGGATTCAGTAGATAGTGTTTCAAGTGTCTTGTATGACCTGCTGCAAAAAGAGGTCATAGCCTTGAGGAAAGCTGGTCATGAGAAAGATCAAAGTCTAAAGGATAAAGACGATGCTATTGAGATGTTAGCAAAGAAGGTAGATACATTGACCAAAGCCATGGAAGTTGAAGCAAAGAAGATGAGAAGGGAAGTAGCTGCAATGGAGAAGGAGGTAGCTGCTATGCGTGTTGAGAAAGAACAAGAGAACAGAGCAAAGCGGTGCAGCAATGTAAAGGGCCCTGTAAACAGTGCCCAGCATCAGCTTATATCTGGAAGAAACGTGACACGGGGTGGATTAACACGCAGCACCCAATGA 1824 0.4578 MAEVSGDGAALSVSGSFREGRGSARRRGGVRPPSMDADEFMNLLHGSDPVKVELNRLENEVRDKDRELSEAQAEIKALRLSERLKEKAVEELTEELSKVDGKLKQTESLLESKNLEIKKISDEKKASMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQDDNKALDRLTKSKEAALLEAERTVQVALAKASMVDDLQNKNQELIKQIEICQEENKILDKMHRQKVAEVEKLTQTVRELEEAVLAGGAAANAVRDYQRKVQEMNEERKTLDRELARAKVTANRVAVVVANEWKDANDKVMPVKQWLEERRFLQGEMQQLRDKLAIVERAAKSEAQLKEKYHLRLKVLEESLRGNSNSSIRGTPEGRSVSNGPSRRQSLGGADNFSKLTSNGFLSKRTPSSQLRSSLSSSTVLKHAKGTSKSFDGGTRSLERSKMLLNGTSPSYSFNQSLEETKEREGSDNWKGNSDDKPNDLPTVDSVDSVSSVLYDLLQKEVIALRKAGHEKDQSLKDKDDAIEMLAKKVDTLTKAMEVEAKKMRREVAAMEKEVAAMRVEKEQENRAKRCSNVKGPVNSAQHQLISGRNVTRGGLTRSTQ 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00209 607 Coils Coil 317 351 - -
Cca06g00209 607 Coils Coil 157 184 - -
Cca06g00209 607 MobiDBLite consensus disorder prediction 464 481 - -
Cca06g00209 607 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 3 607 IPR009768 GO:0007010|GO:0008017
Cca06g00209 607 MobiDBLite consensus disorder prediction 579 607 - -
Cca06g00209 607 MobiDBLite consensus disorder prediction 1 37 - -
Cca06g00209 607 MobiDBLite consensus disorder prediction 369 491 - -
Cca06g00209 607 MobiDBLite consensus disorder prediction 570 607 - -
Cca06g00209 607 MobiDBLite consensus disorder prediction 369 440 - -
Cca06g00209 607 Coils Coil 540 574 - -
Cca06g00209 607 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-1 3 607 - -
Cca06g00209 607 Coils Coil 209 257 - -
Cca06g00209 607 Pfam Microtubule-associated protein 70 38 588 IPR009768 GO:0007010|GO:0008017
Cca06g00209 607 Coils Coil 54 123 - -
Cca06g00209 607 MobiDBLite consensus disorder prediction 447 463 - -
Cca06g00209 607 Coils Coil 268 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00209 Cca-Chr6 5094516 5113507 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00209 - - gmx:100800667 1026.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00209 06 5094516 5113507 Cca06g00209 06 5094516 5113507 ECH