Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00093 ATGCCCCACACACTCCCACTCCACCGCCGACGCGCATACCACCGCCATGCGGCCTCTAGCCTCTCCGCCCTCATGTCGCCGGAATCCACCGTCCTCCACCTCCGCCGGAGCCCCTGCGCCGCCCTCCTCTTCTTCGCCCTCTCTCTCTCATGCGTCCTCCTCTTCAGAAACGCCTACTACTCTCGCTTCGCTCCTTCCAATCCCTTATCTCGCTTTTCCACTCTTCTTCTCTCCGACGATTCCCTCGCTGTTAGCAATGAATATCCACTCGAAAATATTCTTAAAGAGGCTGCTATGAAAGATGGAACAGTTATCTTGACCACATTAAATGAAGCATGGGCAGCACCAAATTCTGTCATTGATCTATTCCTTGAGAGCTTTAGAATTGGAGATCGGACACGTAGACTTTTGAATCACCTAGTAATTATTGCTTTAGACCAGAAAGCATTTATGCGCTGTCAGAAAATACACCCGCATTGCTATTTGCTTGTTAGTGAAGAGATTGATTTTCATGAAGAGGCATACTTTATGACTCCTCACTACTTGAAGATGATGTGGAGACGAATAGATTTCCTACGTTCTGTTCTGGAGATGGGGTACAATTTTGTGTTCACTGATGCTGATATCATGTGGTTTAGAGATCCATTTCCTCGGTTTCACAGTGATGCAGATTTCCAGATAGCATGTGATCATTTCACGGGCAGCTTTGATGATATAGAGAACAGACCAAACGGAGGATTCAACTTTGTAAGGTCCAATAATAGGTCAATTGAGTTTTACAAATTTTGGTATTCTTCACAAGCAACCTATCCAGGATACCATGATCAGGATGTCCTCAATTTTATCAAGGTTGACCCTTTCATTACCGATTTAGGACTGAAGATGAAATTCTTAGATACAGCCAATTTTGGCGGGCTTTGTGAACCAAGTAGAGATTTAAATAAAGTTTGCACGATGCATGCAAATTGTTGCTACGGCATGGATAGTAAACTTCATGATCTTAGAGTTTTGCTTCAAGATTGGAAATATTATTTGACCTTACCTCCAAGTATGAAGAAATTGTCAATTATTTCCTGGAGGGTTCCTCAAAAATGCAGCCTTTATTCTCTCAAGCCTCAAGGTTCACCAGAAAAGAGTGTTGAAGATGATTGA 1152 0.4332 MPHTLPLHRRRAYHRHAASSLSALMSPESTVLHLRRSPCAALLFFALSLSCVLLFRNAYYSRFAPSNPLSRFSTLLLSDDSLAVSNEYPLENILKEAAMKDGTVILTTLNEAWAAPNSVIDLFLESFRIGDRTRRLLNHLVIIALDQKAFMRCQKIHPHCYLLVSEEIDFHEEAYFMTPHYLKMMWRRIDFLRSVLEMGYNFVFTDADIMWFRDPFPRFHSDADFQIACDHFTGSFDDIENRPNGGFNFVRSNNRSIEFYKFWYSSQATYPGYHDQDVLNFIKVDPFITDLGLKMKFLDTANFGGLCEPSRDLNKVCTMHANCCYGMDSKLHDLRVLLQDWKYYLTLPPSMKKLSIISWRVPQKCSLYSLKPQGSPEKSVEDD 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00093 383 PANTHER EXPRESSED PROTEIN-RELATED 28 372 IPR044821 -
Cca06g00093 383 Pfam Nucleotide-diphospho-sugar transferase 136 334 IPR005069 -
Cca06g00093 383 PANTHER GLYCOSYLTRANSFERASE 28 372 - -
Cca06g00093 383 SUPERFAMILY Nucleotide-diphospho-sugar transferases 141 320 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00093 Cca-Chr6 2276082 2279974 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00093 - - gmx:100812064 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00093 06 2276082 2279974 Cca06g00093 06 2276082 2279974 ECH