Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g02064 ATGATGGAGAATGAGCCACATAGCATCTCATCTGACATGGGTGTGAAGATGACCGATTCAAGTGACAACATCCCACTGTTACTCACCCAATCTCACCCTCTCAAAAGGACAGGGACGGTGTGGACAGCAGTGGCACACATAGTGACAGGGGTGATAGGATCTGGAGTGTTGTCTCTGCCTTGGAGCACTGCACAGCTAGGGTGGATTGCAGGCCCGTTTTCAATCCTTCTCGTTGCTTCTGCCACTCTCTTCTCTTCTTTTCTTCAATGCAACACTTATCGCCATCCCTGTCCTGAAGAGGGTCCTCACAGGAGTGCCTCCTACCTTGATGTTGTCCATTTGCATTTAGGGATAAGGAATGGACGCCTCAGTGGCCTTCTTGTGAATATAAGTTTTTATGGTTTTGGAATTGCCTACGTCATTACAGCAGCTATCAGTTTAAGTGCAATCCAAAATTCATTTTGTTACCACAACCAAGGGCGGGAAGCATCATGTGAATCTGCTGATGTATATTATATGCTGCTTTTTGGGGCTGTCCAAATTGTTCTGTCACAGATACCCAACTTCCATAACATCGAATGGTTATCGGTTGTTGCTGCAATTATGTCCTTTACTTATTCTTTCATAGGAGTGGGGCTTTCCATTGCAACAATTATAGAAAAAGGACATGCTGAGGGTAGCATTGGAGGAATCAGTACCTCCAGTGGAACTGAAAAGTTATGGCTGATTTGTCAAGCACTTGGTGACATATCATTCTCATATCCATTCTCGATAATTCTTTTGGAAATACAGGATACTTTGAAAACACCTCCACCAGAAAACCAAACCATGAAGAAGGCCTCAGTAATAGCTGTCACTATCCAAACCTTGTTGTTCCTCTGTTGTGGAGCTGCTGGATATGCTGCCTTTGGTGATAATGCACCCGGAAACCTTTTAGCAGGGTTCGGATCCTCCAAGTCTTATTGGCTTGTGAATTTTGCCAATGTTTGTATAGTGGTTCACCTACTTGGTTCATATCAGGTGTATAGCCAGCCACTTTTTGCCACATTTGAGAATTGGTTCCGTTTTAAATTCCCAGATAGTGAATTTGTGAATCACACATATATGTTGAAACTCCCGTTGCTGCCAGCCTTTGAACTTAATTTTCTCTGCCTGTCTTTCCGAACCGCTTATGTTGTATCGACAGTTGTGGTTGCAATCATCTTTCCTTACTTCAATCAGATTTTGGGAGTTTTGGGTAGCATAAGTTTTTGGCCGTTGACCATATATTTTCCAGTGGAAATTTACTTGGGTCAGTCCAACACTGTAGCGTGGACGACTAAGTGGATCCTGCTTCGGACTTTCACCATTTTTGGCTTTGTATTTGGTTTGTTATGTTTCATTGGATGTATTGAAGGAATAATAACTGAAAAAATAAGCTAA 1422 0.4262 MMENEPHSISSDMGVKMTDSSDNIPLLLTQSHPLKRTGTVWTAVAHIVTGVIGSGVLSLPWSTAQLGWIAGPFSILLVASATLFSSFLQCNTYRHPCPEEGPHRSASYLDVVHLHLGIRNGRLSGLLVNISFYGFGIAYVITAAISLSAIQNSFCYHNQGREASCESADVYYMLLFGAVQIVLSQIPNFHNIEWLSVVAAIMSFTYSFIGVGLSIATIIEKGHAEGSIGGISTSSGTEKLWLICQALGDISFSYPFSIILLEIQDTLKTPPPENQTMKKASVIAVTIQTLLFLCCGAAGYAAFGDNAPGNLLAGFGSSKSYWLVNFANVCIVVHLLGSYQVYSQPLFATFENWFRFKFPDSEFVNHTYMLKLPLLPAFELNFLCLSFRTAYVVSTVVVAIIFPYFNQILGVLGSISFWPLTIYFPVEIYLGQSNTVAWTTKWILLRTFTIFGFVFGLLCFIGCIEGIITEKIS 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g02064 473 Pfam Transmembrane amino acid transporter protein 36 468 IPR013057 -
Cca05g02064 473 PANTHER OS05G0424000 PROTEIN-RELATED 19 472 - -
Cca05g02064 473 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 19 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g02064 Cca-Chr5 40394612 40397614 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g02064 1 450 Organic Solute Cotransporters AT1G77380 46.171 8.34e-146 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g02064 K24917 - gmx:100788056 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g02064 05 40394612 40397614 Cca05g02064 05 40394612 40397614 ECH