Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g02061 ATGTTTGGTAGGGGAACAATGTGGTCGGTTCTGAGACGCAGCAAAGAAGCATGCGGAATTCACAAGCTAAGAGGAAGAACACCCTTCTCTCCTTCCACCCAAAGATCTTTTACTTTTCCCACCCCTCCCGTCGCCACCCATTACTTTCATGCTTTCCGATCCCATCTTCTTCCCAAGGGTGAGCATGTGCCACACATGAGGAACTTTTCTAAGATGGTGTCTGTTGGGGCTCAACACAAGGAGGAGTTGAAGTTGCTTGTGAGTGGGGGTTCTCGAGCCCAGAAAGTGGTTGGTATATGGCTCTTTGGCTCTGCCGCATGGGTGTTCAGCATGGTGGTGCTTGGGGGTTTGACTAGACTCACCCGATCTGGTCTTTCAATGACTGATTGGAAATTCACTGGTACTCTTCCTCCTTTCTCAGACGAGGAATGGTTGCAAGAGTTTGACAAATATAAGCAATCACCTGAATACAAGCGTGTTAATAGAGGCATGAAGATTGAAGAATTCAAATTCATATATTGGATGGAATATGCACATCGTATGTGGGGAAGGGCACTAGGAGTTATGTTTGCTTTGCCCTATTCATATTTTCTTCATAAGGGGTATATTACCTTGAGATTGGGATTGAGACTCTCTGCTCTCTTTGCCCTAGGTGCTGGGCAGGGTCTCATTGGTTGGTGGATGGTCAAAAGTGGTTTAGAGGAACCACCATCCGAATATTCCCAGCCAAGGGTAAGCCCTTATCGTCTTGCAGCTCATCTCACATCAGCGTTTGCTATTTACTGTGGCCTCTTTTGGACTGCACTTTCCGTTGTTATGCCTGAACCGCCAGCTGAATCGCTAACATGGGTTCGTGGGGCAGCTAAAGTGAGGAGACTTGCATTACCTATTAGCGTACTTGTTGGTCTTACTGCTGTCTCTGGTGCATTTGTAGCTGGAAATGATGCTGGGCATGCATTTAATACTTTCCCAAAGATGGGTGATACATGGATACCACAAGACATTTTTGAAATGAAGCCTCTGATTCGTAATTTCTTCGAGAACACATCAACTGTGCAGCTTGATCACCGTGTACTTGCAACTGCAACTCTGATTTCAGTGGGCATTTTATGGTTGTCAACAAGAAAGCTGGACTTACACCCTGCAGTACGATCTGTGATTGGAGGTGCTCTTGGCATGGCAGCTCTTCAGCTACTCACAACAAGCCGGAGCTCTGCCTCACCAAACTCCTCAATGAATTCTCCATTGTTGCCTACTCCTTCCTTGCCAACAACACTTCCAACCCCAAACACTTTCTGA 1299 0.465 MFGRGTMWSVLRRSKEACGIHKLRGRTPFSPSTQRSFTFPTPPVATHYFHAFRSHLLPKGEHVPHMRNFSKMVSVGAQHKEELKLLVSGGSRAQKVVGIWLFGSAAWVFSMVVLGGLTRLTRSGLSMTDWKFTGTLPPFSDEEWLQEFDKYKQSPEYKRVNRGMKIEEFKFIYWMEYAHRMWGRALGVMFALPYSYFLHKGYITLRLGLRLSALFALGAGQGLIGWWMVKSGLEEPPSEYSQPRVSPYRLAAHLTSAFAIYCGLFWTALSVVMPEPPAESLTWVRGAAKVRRLALPISVLVGLTAVSGAFVAGNDAGHAFNTFPKMGDTWIPQDIFEMKPLIRNFFENTSTVQLDHRVLATATLISVGILWLSTRKLDLHPAVRSVIGGALGMAALQLLTTSRSSASPNSSMNSPLLPTPSLPTTLPTPNTF 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g02061 432 MobiDBLite consensus disorder prediction 404 419 - -
Cca05g02061 432 Pfam Cytochrome oxidase assembly protein 99 399 IPR003780 GO:0006784|GO:0016021|GO:0016653
Cca05g02061 432 PANTHER CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15 70 398 IPR023754 GO:0006784|GO:0016020|GO:0016653
Cca05g02061 432 MobiDBLite consensus disorder prediction 404 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g02061 Cca-Chr5 40354376 40357816 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g02061 K02259 - gmx:100786107 710.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g02061 05 40354376 40357816 Cca05g02061 05 40354376 40357816 ECH