Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g02051 ATGTCTGCCTTCGTTGGAAAGTACGCAGatgagcttatcaagaacgccaagtacacagccacaccggggaagggaatctgggcagcagatgagagcactggcaccattggaaagcgtttagccagcattaacgttgagaacattgaggccaaccgccaagcccttcgccagcttctcttcacctcaccaaacgccctccaatacctctccggtgtcatcctctttgaggaaactctgtaccagaaaaccagtgatggaaagccttttgttgaggtgcttgaagagaacaatgtgatcccaggcatcaaagtggaCAAGGGTGTTGTTGAGTTGGCTGGCACAAATGGGGAGACCACCACACAAGGCTTTGACTCTCTTGGAGCTCGGTGCCAGCAGTACTACAAGGCCGGTGCACGCTTTGCCAAGTGGCGTGCAGTTCTCAAAATTGGCCCCAATGAGCCCTCTGAGCTTTCCATCCAGCAAAATGCACAGGGCTTGGCACGCTATGCCATCATTTGCCAGGAGAATGGCCTTGTGCCCATTGTTGAGCCTGAGATTCTCACTGATGGGGCTCATGACATTGTCAAATGTGCTGCTGTCACTGAAACTGTGCTTGCAGCTGTTTACAAGGCACTCAATGAGCACCATGTCCTTCTTGAAGGAACCCTTCTCAAGCCAAACATGGTCACTCCTGGCTCAGATAGCCCAAAGGTAGCACCTGAGGTGATTGCTGAGTACACAGTTCAAGCACTCCGCAGGACTGTCCCAGCTGCGGTGCCAGGGATTGTGTTTCTGTCTGGTGGACAAAGTGAAGAGGAAGCTACgctgaacctgaatgcaatgaacaagttgggggtgttgaagccatggactctctcATTCTCATTTGGGCGAGCACTGCAGCAAAGCACACTCAAGACATGGGGTGGAAAGAAGGAGAATATTGGCAAAGCTCAAGAGTCATTTCTGGCAAGATGCAAGGCCAATTCAGAGGCTACTCTGGGGAAGTATGTTGGTGGAAGTGGAACTGGCTTGGCTTCTGAGAGTTTGTATGTCAAGGACTACAAGTATTAG 1074 0.3473 MSAFVGKYADELIKNAKYTATPGKGIWAADESTGTIGKRLASINVENIEANRQALRQLLFTSPNALQYLSGVILFEETLYQKTSDGKPFVEVLEENNVIPGIKVDKGVVELAGTNGETTTQGFDSLGARCQQYYKAGARFAKWRAVLKIGPNEPSELSIQQNAQGLARYAIICQENGLVPIVEPEILTDGAHDIVKCAAVTETVLAAVYKALNEHHVLLEGTLLKPNMVTPGSDSPKVAPEVIAEYTVQALRRTVPAAVPGIVFLSGGQSEEEATLNLNAMNKLGVLKPWTLSFSFGRALQQSTLKTWGGKKENIGKAQESFLARCKANSEATLGKYVGGSGTGLASESLYVKDYKY 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g02051 357 Pfam Fructose-bisphosphate aldolase class-I 11 357 IPR000741 GO:0004332|GO:0006096
Cca05g02051 357 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 5, CYTOSOLIC-RELATED 1 357 - -
Cca05g02051 357 Gene3D Aldolase class I 1 357 IPR013785 -
Cca05g02051 357 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 217 227 IPR029768 -
Cca05g02051 357 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 1 357 IPR000741 GO:0004332|GO:0006096
Cca05g02051 357 SUPERFAMILY Aldolase 3 357 - -
Cca05g02051 357 CDD FBP_aldolase_I_a 9 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g02051 Cca-Chr5 40280715 40282479 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g02051 1 357 Miscellaneous Gene Families AT3G52930 78.771 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g02051 K01623 - gmx:100792394 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g02051 05 40280715 40282479 Cca05g02051 05 40280715 40282479 ECH