Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g02044 ATGGACATTGTCCCATACTCTAAGCcaaactcaaactcaaactcaaactcTGGCACCGCCACCCCACCATGGCACGACATGTTCCGATCCGCATCCGCCAGACAACCCACGACGGCTCCGGCGAACAGCGACCGGAAACTCCACTCCGACGAGCGTCTGGCCCTCTGCATAGCCATGGCCCACGCAGGGCTGGCCTTCGTGATCCTGACCCTCTTCTCTCTCTACAAACTCCTCCAACAATACCTGAGACCCCTCCAATGGGCCGTTCTCTGTTCCATCCCTCTCAGACTCATTCACCAAACCACCGTTTCCTTTTGGTCTTACCCTCTCCAACTAGGCCTCACTCACACCCTCCTCGCCCTCCCTCTCGCGCTTTTCACCGTTTTCATCGCCACCACCGTTCAGATTCGTCAAGCCTCTTTCGCAATCCTTCTCCGGAAACCAAAGCCCCGCAATCAAAACAAAACTAAAGGCTTTTCCACCATGCTTCGTTTACTTTTCTCCTTTGGGGTCTTTGTTGTTGTTTATGAGAGGCTTGGCAGTGTTGGGTCATTGTCACTTTTAGGATTATGCTTTGTGTTTAGCCCCAAGAATGTGGATTCCACTTTGCGTCCCTCTAGGAGGAGTGCATTTGGGGCGTTTTTCACCAAACTCATACTGAAAAGGTTGAAGACGTTTGTGGCTGTTGGGTTGATTGTTGGCATGATTGTTGGGTTCTTGAGTGGGGTCATGTTCTTTGCCTATGAGATTGGAGGTGAAGGGAAAGGTGCCATGATTTCCCTCAAATTGAGGGTAGAAGAGAACATTTATGCTGAGAGGATTGGGGTCAAGAAGTGGATGGAGGAGAATGATGTTGCTGGAATGGTGGATAAGTATACTGGTCAATTTTATGAGACTGTGTCTGATCAGATTGATGGCTTGGCAATGCAGTACAATATGACTGAGTTTGTGGCGGTTATTAAGCAGTTTGTGATAACTGCTCCTGATAACTCTTCTCAGCCTACAACGGTTTCAGTGAAGGTGCCCTCACCATACATGGAAAGGCTCTCGAGTTTGAAGGGTAGGGTTAGAAATAGGGAGTGGAGGGAGATTTGTGCAGAACTTGATACCCTTTTGAGGGAGTTTTTGATCACTAGGGAGGATTTGGCTATGAGGGCAAAAGGGTTTGCGGTTAAAGGGATGGATGTTGGTCAACGTGTTTTGGCTAGTGGTACAAGTGTGCTTGGAAGGGGTGCGAAGTTTGTGTTCTCCATTTTGAATTCCATAGTGTCTGGTGCTGCTGAGGTTTTCAATTTTGTGTCTCAGACAATGGTGTTTTTGTGGGTTTTGTATTACCTCATAACATCAGAGTCAGGTGGGGTAACGGAACAAGTGATGCACATGGTTCCGATTTCAAACTCGGCTAGGGTCAAATGTGTTGAAGTGTTGGATAAGGCCATTGCAGGAGTCCTTTTGGCCACTGCTGAGATTGCATTTTTCCAAGGGTGCCTGACTTGGCTTTTGTTTAGGCTATACCAAATACATTTCTTGTATGTGTCGACTGTCCTTGCTTTCATTAGCCCTTTGCTACCAATATTTCCATCTTGGTTTGCAACAATTCCCGCAGCAACACAGCTAGTGCTTGAAGGCAGATACATAGTGGCCATTATCTTGTCTGTCACTCACCTTTTCCTAATGGATTATGGGGCAACTGAAATTCTGGATGATGTGCCTGGACACAGTGCATGTCTTACTGGACTGAGCATCATTGGAGGAATGGCTTTGTTTCCATCAGCTCTTGAGGGGGCTATTATGGGGCCACTGATAACTACGGTCATGATGGCTCTGAAGGATTTATATGTTGAATTTGTTTTGGGTGAACCTGATGACAAGGCAAAGCAGAAAGCAGATTAG 1893 0.4665 MDIVPYSKPNSNSNSNSGTATPPWHDMFRSASARQPTTAPANSDRKLHSDERLALCIAMAHAGLAFVILTLFSLYKLLQQYLRPLQWAVLCSIPLRLIHQTTVSFWSYPLQLGLTHTLLALPLALFTVFIATTVQIRQASFAILLRKPKPRNQNKTKGFSTMLRLLFSFGVFVVVYERLGSVGSLSLLGLCFVFSPKNVDSTLRPSRRSAFGAFFTKLILKRLKTFVAVGLIVGMIVGFLSGVMFFAYEIGGEGKGAMISLKLRVEENIYAERIGVKKWMEENDVAGMVDKYTGQFYETVSDQIDGLAMQYNMTEFVAVIKQFVITAPDNSSQPTTVSVKVPSPYMERLSSLKGRVRNREWREICAELDTLLREFLITREDLAMRAKGFAVKGMDVGQRVLASGTSVLGRGAKFVFSILNSIVSGAAEVFNFVSQTMVFLWVLYYLITSESGGVTEQVMHMVPISNSARVKCVEVLDKAIAGVLLATAEIAFFQGCLTWLLFRLYQIHFLYVSTVLAFISPLLPIFPSWFATIPAATQLVLEGRYIVAIILSVTHLFLMDYGATEILDDVPGHSACLTGLSIIGGMALFPSALEGAIMGPLITTVMMALKDLYVEFVLGEPDDKAKQKAD 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g02044 630 PANTHER TRANSMEMBRANE PROTEIN C9ORF5 PROTEIN 1 624 - -
Cca05g02044 630 MobiDBLite consensus disorder prediction 1 20 - -
Cca05g02044 630 Pfam AI-2E family transporter 413 555 IPR002549 -
Cca05g02044 630 PANTHER TRANSMEMBRANE PROTEIN 1 624 IPR002549 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g02044 Cca-Chr5 40191759 40199375 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g02044 - - gsj:114385141 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g02044 05 40191759 40199375 Cca05g02044 05 40191759 40199375 ECH