Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g02042 ATGGGGTGGTTGGATTCTCTTTTGGGAGAAGATGGGAGAAGGTTATTTAAAAGGAAAGACAGTGATGCTGGCGATGCAGGTAGAGCACTGGAAGAACTCAGAGCTTCTCTCTACAATGAGATCCGAACCTCAGAAGGTGCCAAGCGTCAGCAGCAAAGATATTGTGGACCATTGGTGGCACTGTCCTTCAACTTTATGGTTGCAGTTGGGATTATCATGGCAAACAAATTGGTGATGGGTAAAGTTGGCTTCAACTTTCCAATTTTCCTCACATTTGTACACTACATCACTGCATGGTTTCTGCTAGCCATTTTCAAGGGTCTCTCAGTGCTTCCTGTGTCCCCTCCATCCAAAACAACTCCATTCTCATCTTTATTTGCACTTGGTGCTGTTATGGCCTTTGCCTCTGGCCTTGCAAACACTAGTCTCAAGTATAACAGTGTTGGTTTCTACCAAATGGCTAAGATTGCTGTCACCCCAACAATTGTTTTTGCGGAGTTCATTCTTTTTAGAAAAAACATTTCCTTCCCAAAGGTTTTGGCTTTAGCTGTCGTGTCAGCAGGTGTAGCTGTTGCAACTGTAACAGATTTGGAGTTCAATTTATTTGGTGCTTTAATTGCAATTGCTTGGATAATCCCAAGTGCCATAAATAAGATTCTATGGTCTGCTTTACAACAGCAAGGCAACTGGACAGCTCTGGCGTTGATGTGGAAGACAACCCCCATCACAGTTTTCTTCCTTGGGGCTTTGATGCCATGGATAGATCCACCAGGAGTTCTATCCTTCAAGTGGGATGTCAACAACTCAACTGCCATTTTGGTATCTGCTCTCCTTGGTTTTCTCTTGCAATGGTCGGGTGCCTTGGCATTGGGGGCTACTTCTGCTACAACTCATGTTGTTTTAGGACAGTTTAAAACCTGCGTGATACTGTTGGGAGGGTATCTATTATTCGACTCAGATCCTGGGGTTGTGAGCATTGGAGGTGCTGTTGTTGCTCTTTCAGGGATGTCAGTTTACACATCACTGAATTTGAACGAGTCTCAGGAAAATACGAGCAAGCAACTCCCAAAGCAAAGTTCGCCTTCACCCAAACCCAAATCAACAAGTGGAGACAGCACAGATTTGAATGTAAATACTACCACTAGCACCATTGTCTGA 1158 0.4413 MGWLDSLLGEDGRRLFKRKDSDAGDAGRALEELRASLYNEIRTSEGAKRQQQRYCGPLVALSFNFMVAVGIIMANKLVMGKVGFNFPIFLTFVHYITAWFLLAIFKGLSVLPVSPPSKTTPFSSLFALGAVMAFASGLANTSLKYNSVGFYQMAKIAVTPTIVFAEFILFRKNISFPKVLALAVVSAGVAVATVTDLEFNLFGALIAIAWIIPSAINKILWSALQQQGNWTALALMWKTTPITVFFLGALMPWIDPPGVLSFKWDVNNSTAILVSALLGFLLQWSGALALGATSATTHVVLGQFKTCVILLGGYLLFDSDPGVVSIGGAVVALSGMSVYTSLNLNESQENTSKQLPKQSSPSPKPKSTSGDSTDLNVNTTTSTIV 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g02042 385 MobiDBLite consensus disorder prediction 349 385 - -
Cca05g02042 385 Pfam Triose-phosphate Transporter family 65 339 IPR004853 -
Cca05g02042 385 PANTHER SOLUTE CARRIER FAMILY 35 16 362 - -
Cca05g02042 385 PANTHER OS06G0297600 PROTEIN 16 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g02042 Cca-Chr5 40177013 40180456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g02042 69 367 Organic Solute Cotransporters AT1G77610 24.272 4.32e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g02042 - - gmx:100782555 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g02042 05 40177013 40180456 Cca05g02042 05 40177013 40180456 ECH