Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g02040 ATGGGTAGCAACAGTTTGAGGTACGAGATCGCGCAAAACGCATACATCAAACTCGTTCTGCACTCCCTCAAACACCCAACCTCCGCCGTCAACGGCATCTTGATCGGTCGCATCTCCCCTTCCAACGACGTCGTCGAGATCGCCGATGCCGTCCCTCTCTTCCACTCTCACATCCCTCTTCTTCCCCAATTGGAGATATCTCTCATTCTGATAGAGGAGTATTTTTCTGCGAAAGGGTTTAACATAGTGGGCTATTTTCACGCGAATGAGAGATCTGATGACAGTGAGCTTGGTGGTGTGGCCAAGAATATTGGTGATCACATCTGCCGCTACTTTCCCCAAGCTGCAGTTCTAttgTTAGATAACAAGAAGCTTGATGCTTTGAAAAAGAGCAAGGAACGTAGTGCCATAATGCAGGTTAGTAGTATTTGGAAATCGCTTTCCTCGAGACCAATAATAATTTGTTATATGATGTTCATCACTGTTTTTATCCACTCTAGGAATTGTATTTGGGCTTCTTTAGATGATAGTACGTTTGATCAAATTATCAAATATATAGGAACCCTTCTGGTCTATATTCTATATGAAACTATGAATATAGAAATCCAAATCCTTCAGGGCTTTTGTGAATGGAATGGACTAAAGAACCACATCTTTTTTCATGGAACCTTTGAACTCGTTAGAATATGTGTATCTTCTGTAGTTTGCATCATTCTATAA 720 0.4125 MGSNSLRYEIAQNAYIKLVLHSLKHPTSAVNGILIGRISPSNDVVEIADAVPLFHSHIPLLPQLEISLILIEEYFSAKGFNIVGYFHANERSDDSELGGVAKNIGDHICRYFPQAAVLLLDNKKLDALKKSKERSAIMQVSSIWKSLSSRPIIICYMMFITVFIHSRNCIWASLDDSTFDQIIKYIGTLLVYILYETMNIEIQILQGFCEWNGLKNHIFFHGTFELVRICVSSVVCIIL 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g02040 239 CDD MPN_UPF0172 10 154 IPR005366 GO:0072546
Cca05g02040 239 Pfam Uncharacterised protein family (UPF0172) 8 145 IPR005366 GO:0072546
Cca05g02040 239 ProSiteProfiles MPN domain profile. 8 139 IPR037518 -
Cca05g02040 239 PANTHER ER MEMBRANE PROTEIN COMPLEX 2 141 IPR005366 GO:0072546
Cca05g02040 239 PANTHER BNAA03G11160D PROTEIN 2 141 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g02040 K23569 - gmx:100527135 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g02040 05 40164526 40166894 Cca05g02040 05 40164526 40166894 ECH