Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g02039 ATGGATGATGGGGTCGTCCACCATTCCAAACTTCCCATACCCGCTGAAGAAAATGAGGTGGATGACTCTCCCATTGAGCAGGTGAGGCTAACAGTTCCAATAACGGACGACCCTACACAGCCTGCACTAACATTCAGGACATGGACATTGGGGTTGGCATCATGCATTATTCTCTCATTCGTGAACCAGTTCTTCGGTTACAGAACCACCCCTCTGTTTGTTTCTTCTGTGTCAGCGCAGATTGTCTCTCTCCCACTTGGCAAGTTCATGGCGGCGACGCTTCCCACCAAAGCCTTTCGTTTACCCTTCACCAAATGGTCCTTCTCCTTCAACCCTGGTCCCTTCAATTTGAAGGAACATGCACTCATTACCATCTTTGCCAGCGCTGGATCCAGCGGTGTCTATGCCATTAATATTATCACAATTGTTAAGGCTTTCTATCACAGGAGTATCCATCCACTCGCTGCTTTTCTGTTGGCACTGTCCACCCAGATGCTTGGTTATGGATGGGCTGGGATTTTCAGAAAATTCCTTGTGGATTCCCCGTACATGTGGTGGCCTTCAAATCTTGTCCAGGTGTCTCTATTTAGGGCATTTCATGAAAAGGAGAAAAGGCCTAAAGGAGGAAACACAAGGCTGCAATTCTTTTTCCTGGTGTTTGTGGCAAGCTTTGCTTATTACGTTATTCCAGGCTACCTTTTCCAAGCAATATCAACAATCTCCTTAGTTTGCTTGATATGGAAAAACTCTATAGTTGCTCAACAAATTGGTTCAGGCATGAAGGGCCTTGGCATTGGTTCATTTGGCCTGGACTGGAACACCGTGGCTGGCTTCTTAGGCAGTCCTTTGGCTTCTCCTGGATTCGCCATCATCAACACACTCGTTGGATTTGGGCTGTTCCTTTATGTACTGATTCCCATTTCCTATTGGAACAACGTGTATGATGCCAAGAAGTTCCCCATCATCAGTTCTCACACGTTTGATTCCTCCGGCGCTGTGTATAATGTCACTCGGATTCTCGATGCTAAAACTTTTGATATTGATATGGACAGATATAACAACTACAGCAAGCTCTATCTTAGCATCACATTTGCTTTCGACTATGGATTGAGCTTTGCAACTCTGACTGCCACTATTTCACATGTTGTCCTCTTCCATGGAAAGACGGTTTACCAAATGTGGAAGAAGACAGCATCTGCACTGAAAGAAGAAGGATTTGGAGATGTGCACACAAGAATTATGAAGAGAAACTATAACCAAGTACCTGAATGGTGGTTTGTCAGCATTTTGGTTTTAATGATTGGTCTAGCCTTGCTAACATGTGAAGGCTTTGGCAAGCAACTCCAATTGCCATGGTGGGGAGTCTTAATGTCTCTATTAATTGCGTTAGTTTTCACTTTGCCAGTTGGGGTCATTCAAGCAACAACCAATATGCAAACTGGACTCAACGTGATTACAGAGTTAATAATTGGGTACATTTACCCAGGAAGGCCCCTTGCTAATGTAGCCTTCAAGACATACGGGTACATCAGCATGGCACAGGCACTCGGGTTCCTTGGTGACTTCAAATTAGGCCACTATATGAAAATTCCTCCAAGATCTATGTTCGTCGTGCAGTTGGTAGGTACCGTAGTTGCTTCAACTGTGTGCTTTGGCACAGCATGGTGGCTTCTAACAAGTATTCCAAACATATGTGATGAAGCAAATTTGCCAAGTGGTAGTCCATGGACTTGCCCTGGTGACGATGTGTTTTACAATGCTTCAATCATATGGGGAGTGGTGGGGCCAAAGAGAATGTTCACCAAGGCTGGCATTTACCCTGGCTTGAATTGGTTTTTCCTCATTGGATTACTTGCTCCTGTTCCAGTGTGGCTGCTTGCTCGCAAATTCCCCAACCACAAGTGGATTGAGCTCATCAACATGCCCCTCATCATTTCTGGTGCCAATGGTATTCCACCAGCCAGATCAGTCATCTACATAACTTGGGGTATTGTGGGGTTATTCTTCAACATATATATTTACAGGAAGTTCAAGGCATGGTGGGCTAGACACACTTACATCCTCTCAGCTGCTTTGGATGCTGGTATTGCTTTCATGGGTGTGTTGCTCTATTTTGCCCTCCAAAGTTATGATATCTTTGGTCCAGTTTGGTGGGGTCAAGATGCTGATGACCACTGCCCTTTGGCCAAGTGCCCCACAGCTCCAGGAGTAATTGCTAGTGGATGCCCTGTTCTATGA 2238 0.4526 MDDGVVHHSKLPIPAEENEVDDSPIEQVRLTVPITDDPTQPALTFRTWTLGLASCIILSFVNQFFGYRTTPLFVSSVSAQIVSLPLGKFMAATLPTKAFRLPFTKWSFSFNPGPFNLKEHALITIFASAGSSGVYAINIITIVKAFYHRSIHPLAAFLLALSTQMLGYGWAGIFRKFLVDSPYMWWPSNLVQVSLFRAFHEKEKRPKGGNTRLQFFFLVFVASFAYYVIPGYLFQAISTISLVCLIWKNSIVAQQIGSGMKGLGIGSFGLDWNTVAGFLGSPLASPGFAIINTLVGFGLFLYVLIPISYWNNVYDAKKFPIISSHTFDSSGAVYNVTRILDAKTFDIDMDRYNNYSKLYLSITFAFDYGLSFATLTATISHVVLFHGKTVYQMWKKTASALKEEGFGDVHTRIMKRNYNQVPEWWFVSILVLMIGLALLTCEGFGKQLQLPWWGVLMSLLIALVFTLPVGVIQATTNMQTGLNVITELIIGYIYPGRPLANVAFKTYGYISMAQALGFLGDFKLGHYMKIPPRSMFVVQLVGTVVASTVCFGTAWWLLTSIPNICDEANLPSGSPWTCPGDDVFYNASIIWGVVGPKRMFTKAGIYPGLNWFFLIGLLAPVPVWLLARKFPNHKWIELINMPLIISGANGIPPARSVIYITWGIVGLFFNIYIYRKFKAWWARHTYILSAALDAGIAFMGVLLYFALQSYDIFGPVWWGQDADDHCPLAKCPTAPGVIASGCPVL 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g02039 745 Pfam OPT oligopeptide transporter protein 43 706 IPR004813 GO:0035673
Cca05g02039 745 PANTHER ISP4 LIKE PROTEIN 16 745 IPR004648 GO:0055085
Cca05g02039 745 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 21 710 IPR004648 GO:0055085
Cca05g02039 745 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 27 708 IPR004813 GO:0035673
Cca05g02039 745 PANTHER OLIGOPEPTIDE TRANSPORTER OPT FAMILY PROTEIN 16 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g02039 Cca-Chr5 40157729 40162476 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g02039 2 745 Organic Solute Cotransporters AT5G55930 68.809 0.0 1058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g02039 - - gmx:100776230 1380.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g02039 05 40157729 40162476 Cca05g02039 05 40157729 40162476 ECH