Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g02028 ATGAACTTTCACTCTGAAGCGGTGTGGGCAAGGAATGGAATATTGGAATTTGGAATTCAAACACGCCCTCGCCTCTGCTTCGTTCATCAAACCTGGCGCAGCATCACTCAACACAGTCAGGTCATGGAAGTTCCACTGCCACTGGATAAATTAGCTTTAGACGTGATTCGTAATGAAGCTTCCCATGGAAACACAAACAATAGCAAGATATATGTAGTTCTAGTAGCAACTGGAAGCTTTAATCCACCTACTTTCATGCATTTACGCATGTTTGAGCTTGCAAGAGATGCATTGAATTCAGATGGCTACTGTGTTATTGGAGGTTACATGTCTCCTGTGAATGATGCATACAAGAAAAAGAGCCTCATATCTGCTGAACATCGAATACGATTGTGTCATTTAGCCTGCAAAAGTTCAGATTTTGTAATGGTTGATCCATGGGAGGCAAGTCAGAGCACATACCAACGGACCTTAACTGTTCTCTCCAGAGTCCACAATTCCGTTTGTGAGACAGGGTTGGTATCTAGAGAATCTCTCAAGGTCATGCTTCTCTGTGGTTCTGATCTTCTTCATTCTTTTGGCATTCCTGGATTCTGGATTCCTGACCAGGTTAATAGTATATGCAGAGATTATGGAGTAGTCTGCATTCGCAGAGAAGGACAAGATGTTGAGAAGACTATATCTAAAGATGAAATTCTGAAGCAGAATCAGGTATTCTAG 720 0.4194 MNFHSEAVWARNGILEFGIQTRPRLCFVHQTWRSITQHSQVMEVPLPLDKLALDVIRNEASHGNTNNSKIYVVLVATGSFNPPTFMHLRMFELARDALNSDGYCVIGGYMSPVNDAYKKKSLISAEHRIRLCHLACKSSDFVMVDPWEASQSTYQRTLTVLSRVHNSVCETGLVSRESLKVMLLCGSDLLHSFGIPGFWIPDQVNSICRDYGVVCIRREGQDVEKTISKDEILKQNQVF 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g02028 239 Pfam Cytidylyltransferase-like 75 221 IPR004821 GO:0003824|GO:0009058
Cca05g02028 239 SUPERFAMILY Nucleotidylyl transferase 72 235 - -
Cca05g02028 239 PANTHER NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE 64 235 - -
Cca05g02028 239 Gene3D HUPs 69 238 IPR014729 -
Cca05g02028 239 PANTHER NICOTINAMIDE-NUCLEOTIDE ADENYLYLTRANSFERASE 64 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g02028 Cca-Chr5 40080219 40084556 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g02028 K06210 - gmx:100793809 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g02028 05 40080219 40084556 Cca05g02028 05 40080219 40084556 ECH