Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g02025 ATGTCTTCCTCCACCTTCCTCTGCCCCGTAGCATTTAGCCTCTCACAGAAGCCACTTCAATCCACCTTTCTTCAGTCCTCCCCAAACCCTTCTCTTCTAACTCTAAGCATTCTTCCAAAGAAATTGAGAAAAGCCCACCAACTTAGAAGCCTCATAGTGGCCAAATCCAATGGAAGTGACTCTGCTGATGTTCCTGACCGTTTGATTTCAGCACTTTGCTATTTTTACCCTTTCTTTGATGGCATACAGTATGGGAAGTATGTAATCACTCAGTTCTACCCTGTCCAAGCCATTGTTCAGCCATTGGTTCCTGCAATCAGAGTTTTCAAAAGCTTCCCCTTTAACGGGTTCCTGGTCTTTTTGACCCTCTATTTTGTTGTGGTGAGAAACCCCAATTTCAGTAGATATGTGAGGTTCAACACTATGCAAGCCATTGTGCTTGATGTGCTCTTGATTTTCCCTGACCTCTTGGAAAGAGGGTTTAATCCCAGAGATGGTTTGGGGCTGGATTTGTTGATGAGTTTGGACAGCACTGTGTTTTTGTTCCTCTTGGTGTGCTTGATTTATGGTTCTTCTTCTTGCCTGCTGGGTCAAATCCCTAGATTACCCATTGTTGCTGAGGCAGCTGATAGGCAGGGGGCAGAGGAAACACAGATAGAGGGAATTTAA 669 0.4469 MSSSTFLCPVAFSLSQKPLQSTFLQSSPNPSLLTLSILPKKLRKAHQLRSLIVAKSNGSDSADVPDRLISALCYFYPFFDGIQYGKYVITQFYPVQAIVQPLVPAIRVFKSFPFNGFLVFLTLYFVVVRNPNFSRYVRFNTMQAIVLDVLLIFPDLLERGFNPRDGLGLDLLMSLDSTVFLFLLVCLIYGSSSCLLGQIPRLPIVAEAADRQGAEETQIEGI 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g02025 222 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 17 212 IPR005691 -
Cca05g02025 222 Pfam Chloroplast import apparatus Tic20-like 67 209 IPR005691 -
Cca05g02025 222 PANTHER PROTEIN TIC 20-V, CHLOROPLASTIC 17 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g02025 Cca-Chr5 40068332 40070283 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g02025 - - gmx:100777912 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g02025 05 40068332 40070283 Cca05g02025 05 40068332 40070283 ECH